The gene/protein map for NC_011766 is currently unavailable.
Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884183

Identifier: 218884183

GI number: 218884183

Start: 836278

End: 837330

Strand: Reverse

Name: 218884183

Synonym: DKAM_0872

Alternate gene names: NA

Gene position: 837330-836278 (Counterclockwise)

Preceding gene: 218884184

Following gene: 218884182

Centisome position: 61.33

GC content: 48.43

Gene sequence:

>1053_bases
ATGGGGAAGCCTATTTATTTAGCATGGAGAATTAATTATTCCGGGTGCATCCACTTGAACCCGCCTCTAGTAGATCTCCA
CGAGGATATAGCGGCCTATGTTCTCTCAGGAAGCCTGCTCAACCCATTCCCATTGAAACCCTTTGATATCGATGAACCAC
TCCGGCACGCTGATATCCCGAAGTACCTCGCCAGCAACACAAGGCTCGTTGTCGCCAGTATCTTCCCCATGATACCCTGG
TACTCCCGTGGTGGGAGGATATCTTACAAGCATTATCCGAGCCTTGAGCTGGTTTACGCAGGGTTGGACTTATACAGGAA
TATTGTGTTAGCCCACAGAGAGTTCAAGCTTGTATTAGGTAGAGACCAGCTTCAGGGACTCTTCAATGAGAAAAATGGTA
GCATAGGCTTGCTTGTAGGGCTTGAAGGGGCTGATTCCTTGAGGAGCCCAGAGGACCTGGATCTCTTATATGCTGGCGGG
CTACGTGTATTAGGGTTAACCTGGAACTATAACAATAAGTACGCTTCCTCCTGTAGGACACAGATCGATAATGGCTTGAC
GAGGGAGGGTTTAGAGCTCATTGGGAGAGCCGTGGAGCTAGGGGTAGCAGTGGATCTAGCCCATGCAAGCGGGAAAACAG
TGAGAGACACATACGAGGCAACAGGGAAGCCCGTAATAGTCAGTCACGCCAATACCAGATCGGTTCATAACCATCCTAGG
AACCTTGATGACAAGACGCTGGAAGTAGTGGCAGAGAGCAAGGGGGTTGTAGGACTAGTATTCATAGCTTCATTCGTGTC
AACGGGTGTACCAGATGTATCCAGCCTGGTCAGACACGCGGTATATATAAGAGATAATTATGGAGTGGACATATTAGCAA
TAGGCTCAGACTACTTCGGCTCACTTGATGCACCGCTTGTTAAAGGACTGGAATCCATCGATAAAATAGGGAGCTTATGG
AGCAAGCTACTCGAGGAAGGCTTCACTAGAGAAGACATCGAGAAAATAGCCTGGAGAAACCCGCTCAGAGCACTTACAGC
ATGGCTGAAATAA

Upstream 100 bases:

>100_bases
TAGTCATCATACCTTAAACGCTTAACATTGATACTGGATGTCACCAGGTATAACTACACGCAGGCGGAGTCTACTCTATC
CTTGAGTAACCTACGCGTCA

Downstream 100 bases:

>100_bases
CTCATAATCCAACCCTACTCCAGTCCACGTAGGCCTTATAGCTAGGTTTTTATAGTTGTACATAGAGATATATCTTGGGG
AGGGTTATCCATGGTTAAAT

Product: peptidase

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MGKPIYLAWRINYSGCIHLNPPLVDLHEDIAAYVLSGSLLNPFPLKPFDIDEPLRHADIPKYLASNTRLVVASIFPMIPW
YSRGGRISYKHYPSLELVYAGLDLYRNIVLAHREFKLVLGRDQLQGLFNEKNGSIGLLVGLEGADSLRSPEDLDLLYAGG
LRVLGLTWNYNNKYASSCRTQIDNGLTREGLELIGRAVELGVAVDLAHASGKTVRDTYEATGKPVIVSHANTRSVHNHPR
NLDDKTLEVVAESKGVVGLVFIASFVSTGVPDVSSLVRHAVYIRDNYGVDILAIGSDYFGSLDAPLVKGLESIDKIGSLW
SKLLEEGFTREDIEKIAWRNPLRALTAWLK

Sequences:

>Translated_350_residues
MGKPIYLAWRINYSGCIHLNPPLVDLHEDIAAYVLSGSLLNPFPLKPFDIDEPLRHADIPKYLASNTRLVVASIFPMIPW
YSRGGRISYKHYPSLELVYAGLDLYRNIVLAHREFKLVLGRDQLQGLFNEKNGSIGLLVGLEGADSLRSPEDLDLLYAGG
LRVLGLTWNYNNKYASSCRTQIDNGLTREGLELIGRAVELGVAVDLAHASGKTVRDTYEATGKPVIVSHANTRSVHNHPR
NLDDKTLEVVAESKGVVGLVFIASFVSTGVPDVSSLVRHAVYIRDNYGVDILAIGSDYFGSLDAPLVKGLESIDKIGSLW
SKLLEEGFTREDIEKIAWRNPLRALTAWLK
>Mature_349_residues
GKPIYLAWRINYSGCIHLNPPLVDLHEDIAAYVLSGSLLNPFPLKPFDIDEPLRHADIPKYLASNTRLVVASIFPMIPWY
SRGGRISYKHYPSLELVYAGLDLYRNIVLAHREFKLVLGRDQLQGLFNEKNGSIGLLVGLEGADSLRSPEDLDLLYAGGL
RVLGLTWNYNNKYASSCRTQIDNGLTREGLELIGRAVELGVAVDLAHASGKTVRDTYEATGKPVIVSHANTRSVHNHPRN
LDDKTLEVVAESKGVVGLVFIASFVSTGVPDVSSLVRHAVYIRDNYGVDILAIGSDYFGSLDAPLVKGLESIDKIGSLWS
KLLEEGFTREDIEKIAWRNPLRALTAWLK

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M19 family [H]

Homologues:

Organism=Homo sapiens, GI11641269, Length=261, Percent_Identity=30.2681992337165, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI189458885, Length=225, Percent_Identity=30.2222222222222, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4758190, Length=225, Percent_Identity=30.2222222222222, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI193211608, Length=261, Percent_Identity=26.4367816091954, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI193211610, Length=260, Percent_Identity=26.1538461538462, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI281362638, Length=276, Percent_Identity=31.1594202898551, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281362636, Length=276, Percent_Identity=31.1594202898551, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI161083233, Length=218, Percent_Identity=33.0275229357798, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI221475880, Length=344, Percent_Identity=29.0697674418605, Blast_Score=98, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008257 [H]

Pfam domain/function: PF01244 Peptidase_M19 [H]

EC number: NA

Molecular weight: Translated: 38735; Mature: 38604

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKPIYLAWRINYSGCIHLNPPLVDLHEDIAAYVLSGSLLNPFPLKPFDIDEPLRHADIP
CCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCH
KYLASNTRLVVASIFPMIPWYSRGGRISYKHYPSLELVYAGLDLYRNIVLAHREFKLVLG
HHHHCCCEEEEEEHHHCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHEEEEEC
RDQLQGLFNEKNGSIGLLVGLEGADSLRSPEDLDLLYAGGLRVLGLTWNYNNKYASSCRT
CHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEECCCCHHHHHHHH
QIDNGLTREGLELIGRAVELGVAVDLAHASGKTVRDTYEATGKPVIVSHANTRSVHNHPR
HHHCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCC
NLDDKTLEVVAESKGVVGLVFIASFVSTGVPDVSSLVRHAVYIRDNYGVDILAIGSDYFG
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCEEEEEECCCCCC
SLDAPLVKGLESIDKIGSLWSKLLEEGFTREDIEKIAWRNPLRALTAWLK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
GKPIYLAWRINYSGCIHLNPPLVDLHEDIAAYVLSGSLLNPFPLKPFDIDEPLRHADIP
CCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCH
KYLASNTRLVVASIFPMIPWYSRGGRISYKHYPSLELVYAGLDLYRNIVLAHREFKLVLG
HHHHCCCEEEEEEHHHCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHEEEEEC
RDQLQGLFNEKNGSIGLLVGLEGADSLRSPEDLDLLYAGGLRVLGLTWNYNNKYASSCRT
CHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEECCCCHHHHHHHH
QIDNGLTREGLELIGRAVELGVAVDLAHASGKTVRDTYEATGKPVIVSHANTRSVHNHPR
HHHCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCC
NLDDKTLEVVAESKGVVGLVFIASFVSTGVPDVSSLVRHAVYIRDNYGVDILAIGSDYFG
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCEEEEEECCCCCC
SLDAPLVKGLESIDKIGSLWSKLLEEGFTREDIEKIAWRNPLRALTAWLK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1313537 [H]