| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884184
Identifier: 218884184
GI number: 218884184
Start: 837428
End: 837925
Strand: Reverse
Name: 218884184
Synonym: DKAM_0873
Alternate gene names: NA
Gene position: 837925-837428 (Counterclockwise)
Preceding gene: 218884185
Following gene: 218884183
Centisome position: 61.38
GC content: 47.79
Gene sequence:
>498_bases ATGCTGGTGAAGCTATATGCTCCCCTGCAACCGGGAAGCAAGGAGGAGATAAGGCTCCTCGAGGCAGTATTATACACAGC GACAATATTCGGGCCAGACCTCACTACACTGCTCTCCAGCAGCGAAGATAAGTCAAGCATTATCAAGGAGCTCTCCACAG CAGCAGCCGTCTTCGCGAGGTTCAAGGCCAATTACTCCTATGGCTTAATAAGCGAGGAGCTCGGGGTACCCGAGAAAACT GTTAGGAAATACCTGAGTATCAAGGACGCCCTCAGCAAGGCTGTTTCAGACGTGTTAAAAAAACTGGAGACTGGAAACGG CTTCATCGAAGTAGACATACCTGATGTAGAATCCTATGTAGTGAAACTAAGTAGCCTAGAAAGAGAAAACAATGAGTTAA GGCAGAGAAACCAGGAACTGGAGACACGGCTAGCAGAGTTAAGGGGGAAGCTGGAGCTGGTTAAGAAGCACTTGGATGAA GTCTATAAAATGCTCTAG
Upstream 100 bases:
>100_bases AAACAACAATCTGAGGCTTTGTTTGTGTTGTGGGAAAAATAGTGGGAAACATATTTAAGCATATTAATACATAATATACT TACCGGGGTGAAAGCATACA
Downstream 100 bases:
>100_bases TCATCATACCTTAAACGCTTAACATTGATACTGGATGTCACCAGGTATAACTACACGCAGGCGGAGTCTACTCTATCCTT GAGTAACCTACGCGTCAATG
Product: transcriptional regulator-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLVKLYAPLQPGSKEEIRLLEAVLYTATIFGPDLTTLLSSSEDKSSIIKELSTAAAVFARFKANYSYGLISEELGVPEKT VRKYLSIKDALSKAVSDVLKKLETGNGFIEVDIPDVESYVVKLSSLERENNELRQRNQELETRLAELRGKLELVKKHLDE VYKML
Sequences:
>Translated_165_residues MLVKLYAPLQPGSKEEIRLLEAVLYTATIFGPDLTTLLSSSEDKSSIIKELSTAAAVFARFKANYSYGLISEELGVPEKT VRKYLSIKDALSKAVSDVLKKLETGNGFIEVDIPDVESYVVKLSSLERENNELRQRNQELETRLAELRGKLELVKKHLDE VYKML >Mature_165_residues MLVKLYAPLQPGSKEEIRLLEAVLYTATIFGPDLTTLLSSSEDKSSIIKELSTAAAVFARFKANYSYGLISEELGVPEKT VRKYLSIKDALSKAVSDVLKKLETGNGFIEVDIPDVESYVVKLSSLERENNELRQRNQELETRLAELRGKLELVKKHLDE VYKML
Specific function: Unknown
COG id: COG1318
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022285 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18581; Mature: 18581
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKLYAPLQPGSKEEIRLLEAVLYTATIFGPDLTTLLSSSEDKSSIIKELSTAAAVFAR CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH FKANYSYGLISEELGVPEKTVRKYLSIKDALSKAVSDVLKKLETGNGFIEVDIPDVESYV HHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH VKLSSLERENNELRQRNQELETRLAELRGKLELVKKHLDEVYKML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLVKLYAPLQPGSKEEIRLLEAVLYTATIFGPDLTTLLSSSEDKSSIIKELSTAAAVFAR CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH FKANYSYGLISEELGVPEKTVRKYLSIKDALSKAVSDVLKKLETGNGFIEVDIPDVESYV HHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH VKLSSLERENNELRQRNQELETRLAELRGKLELVKKHLDEVYKML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]