| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884167
Identifier: 218884167
GI number: 218884167
Start: 821800
End: 822018
Strand: Reverse
Name: 218884167
Synonym: DKAM_0856
Alternate gene names: NA
Gene position: 822018-821800 (Counterclockwise)
Preceding gene: 218884170
Following gene: 218884165
Centisome position: 60.21
GC content: 42.47
Gene sequence:
>219_bases ATGTTTATTAAGAAACTAGGTAAGACGAGTATCCAGCTATACAACGAGTTTAGAGTAGGCGATAGACTACTCGCTCTAGC AGGCCTCTTGGAAAGCCCTATCGAGTTGAAGAACTACAATAGGGTTATACTAGCATCTGACGCTGTATGTGGTCATGCCG AGCAGATCGGTTTAGCAGAGCACTTGATACACGAGTATATTAAATCCAGGAAGAAATGA
Upstream 100 bases:
>100_bases CCGCAAGTGGAGGCCTGGGCAGTTCGTTATCTTCATGATCCATCCTAGAGGAGAACGAGTACCAATGTCTGTTGCTATAG TCAACGGCTCGAATATTGGG
Downstream 100 bases:
>100_bases GATGCTAGATTAGTCACCTAGAGTAGAGTTCGTAGTTTAGAATCTTTGTTAACGCCATTAGAGTAGCGGGCTTGGATCTT ACAACAGCGTTTTTAGTCAA
Product: ferredoxin--NADP(+) reductase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MFIKKLGKTSIQLYNEFRVGDRLLALAGLLESPIELKNYNRVILASDAVCGHAEQIGLAEHLIHEYIKSRKK
Sequences:
>Translated_72_residues MFIKKLGKTSIQLYNEFRVGDRLLALAGLLESPIELKNYNRVILASDAVCGHAEQIGLAEHLIHEYIKSRKK >Mature_72_residues MFIKKLGKTSIQLYNEFRVGDRLLALAGLLESPIELKNYNRVILASDAVCGHAEQIGLAEHLIHEYIKSRKK
Specific function: Unknown
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8166; Mature: 8166
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIKKLGKTSIQLYNEFRVGDRLLALAGLLESPIELKNYNRVILASDAVCGHAEQIGLAE CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHCCHHH HLIHEYIKSRKK HHHHHHHHHCCC >Mature Secondary Structure MFIKKLGKTSIQLYNEFRVGDRLLALAGLLESPIELKNYNRVILASDAVCGHAEQIGLAE CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHCCHHH HLIHEYIKSRKK HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA