| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884165
Identifier: 218884165
GI number: 218884165
Start: 820328
End: 821383
Strand: Reverse
Name: 218884165
Synonym: DKAM_0854
Alternate gene names: NA
Gene position: 821383-820328 (Counterclockwise)
Preceding gene: 218884167
Following gene: 218884163
Centisome position: 60.16
GC content: 42.23
Gene sequence:
>1056_bases GTGGATGCCTTAATGCAGGGGGTATTTGATAATATAGTGGATAAGGTATTCAATGGTGATCTCTACATTGTATTTAAGCC TCTTGACCTCCAGCTACATGGATATCATTCGAAGGATAACATAGTGTTGAATATACCTAACAGGAGGAGTAGGAGAATAG GGTTTGGATTACTTGAGGTTGCCACAGAATCGAGTAGTGAGAGTGTTGATTGGAGGCTGAAACTCAACGGTATAAGTGTT ACAAAGGAGTTCAAGCCCCATTACATGGTTAGATATAAGGATAGATTAATCTCTAAGTTCGTGTATGATGTAACACCCAT CCTAAACACGGAGGAATCAATGAGGAGGGAATGGGTGAATCTAACAGTTAAACACGAGGGGGGTTCACCAGTAAAGCTGC GGAAGATCCAGCTTGCAGCATTATACGAGGATACGGATGCCTCTACAAGCCTTAAATACTGGACAGGGCTGCTCGTCCTA TATCCAGGTGAGTCGTATCCTTTAGCAAAATGTAAGAATATAGGGGGCCATGGCATAAGGATTTCAAGCTACATTCCTCA GAGGACCAGTAGATTAATTATGCGCATTAATGGTATGAGGTATGAGCTGACGAGTCCGTATACTGAGGGATTCGAGGAAT ATATTATTAATAACATTAATACTTCACCAGGGGATGATGCGATAGCATTGGTTAATGAGGGAGAAGGAGGGGCAATCATC ACCTCCAGCATAATACTGTATTCAATAAGAATGCCTATTCCTGTTATCGAGGTTGAAGATATAAATGCGAGTAGAGCAGG AGGGCAACTCAAGATCATCGTCTCACTGATGAATAAGGGTGAGTCATCACCGGACTTCATTGTTTTCACAGTGCTATATA AGGGAAGCATGTTAACGAGCATGAAGATTGATAAGCCTTTAAAATCCAGTGAACGCAGTATTAGTGAATTAGTCGTTCCC GGCATAGTTAAAACAGGTGAACCCATCACGCTGAGGATTGTTTGGAGCAAGCTATCTAGAACATGGTTCACTGAGAAGCA GATACTCGTGCCCTAG
Upstream 100 bases:
>100_bases CCAGGGGTTCAAGCCGTTCATCAATCACGTGCGGCAGGGCGTCTTCATCCAATAATTACTAAATAACCCTCTAGGAGATT TTATATCAATAGCTAGGGGA
Downstream 100 bases:
>100_bases ATATATCTCAGGCTAAGCTTCTTCTCAGAGACATACTCCTCTAGTAAAGACCTATGCTCCTGCCTTGTCCCCTTCTTCTC AACTATTACTTCAACCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MDALMQGVFDNIVDKVFNGDLYIVFKPLDLQLHGYHSKDNIVLNIPNRRSRRIGFGLLEVATESSSESVDWRLKLNGISV TKEFKPHYMVRYKDRLISKFVYDVTPILNTEESMRREWVNLTVKHEGGSPVKLRKIQLAALYEDTDASTSLKYWTGLLVL YPGESYPLAKCKNIGGHGIRISSYIPQRTSRLIMRINGMRYELTSPYTEGFEEYIINNINTSPGDDAIALVNEGEGGAII TSSIILYSIRMPIPVIEVEDINASRAGGQLKIIVSLMNKGESSPDFIVFTVLYKGSMLTSMKIDKPLKSSERSISELVVP GIVKTGEPITLRIVWSKLSRTWFTEKQILVP
Sequences:
>Translated_351_residues MDALMQGVFDNIVDKVFNGDLYIVFKPLDLQLHGYHSKDNIVLNIPNRRSRRIGFGLLEVATESSSESVDWRLKLNGISV TKEFKPHYMVRYKDRLISKFVYDVTPILNTEESMRREWVNLTVKHEGGSPVKLRKIQLAALYEDTDASTSLKYWTGLLVL YPGESYPLAKCKNIGGHGIRISSYIPQRTSRLIMRINGMRYELTSPYTEGFEEYIINNINTSPGDDAIALVNEGEGGAII TSSIILYSIRMPIPVIEVEDINASRAGGQLKIIVSLMNKGESSPDFIVFTVLYKGSMLTSMKIDKPLKSSERSISELVVP GIVKTGEPITLRIVWSKLSRTWFTEKQILVP >Mature_351_residues MDALMQGVFDNIVDKVFNGDLYIVFKPLDLQLHGYHSKDNIVLNIPNRRSRRIGFGLLEVATESSSESVDWRLKLNGISV TKEFKPHYMVRYKDRLISKFVYDVTPILNTEESMRREWVNLTVKHEGGSPVKLRKIQLAALYEDTDASTSLKYWTGLLVL YPGESYPLAKCKNIGGHGIRISSYIPQRTSRLIMRINGMRYELTSPYTEGFEEYIINNINTSPGDDAIALVNEGEGGAII TSSIILYSIRMPIPVIEVEDINASRAGGQLKIIVSLMNKGESSPDFIVFTVLYKGSMLTSMKIDKPLKSSERSISELVVP GIVKTGEPITLRIVWSKLSRTWFTEKQILVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39599; Mature: 39599
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALMQGVFDNIVDKVFNGDLYIVFKPLDLQLHGYHSKDNIVLNIPNRRSRRIGFGLLEV CCHHHHHHHHHHHHHHHCCCEEEEEEECEEEEECCCCCCCEEEECCCCCCCCCCCEEEEE ATESSSESVDWRLKLNGISVTKEFKPHYMVRYKDRLISKFVYDVTPILNTEESMRREWVN ECCCCCCCEEEEEEECCEEEEEECCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHEEEE LTVKHEGGSPVKLRKIQLAALYEDTDASTSLKYWTGLLVLYPGESYPLAKCKNIGGHGIR EEEEECCCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHCCCCCCCEE ISSYIPQRTSRLIMRINGMRYELTSPYTEGFEEYIINNINTSPGDDAIALVNEGEGGAII EECCCCCHHHEEEEEECCEEEEECCCHHHCHHHHHHHCCCCCCCCCEEEEEECCCCCEEE TSSIILYSIRMPIPVIEVEDINASRAGGQLKIIVSLMNKGESSPDFIVFTVLYKGSMLTS EEEEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEHHCCCCCCCEEEEEEEECCCEEEE MKIDKPLKSSERSISELVVPGIVKTGEPITLRIVWSKLSRTWFTEKQILVP EECCCCCCHHHHHHHHHHCCCEECCCCCEEEEEEEEHHHHHCCCCCEEECC >Mature Secondary Structure MDALMQGVFDNIVDKVFNGDLYIVFKPLDLQLHGYHSKDNIVLNIPNRRSRRIGFGLLEV CCHHHHHHHHHHHHHHHCCCEEEEEEECEEEEECCCCCCCEEEECCCCCCCCCCCEEEEE ATESSSESVDWRLKLNGISVTKEFKPHYMVRYKDRLISKFVYDVTPILNTEESMRREWVN ECCCCCCCEEEEEEECCEEEEEECCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHEEEE LTVKHEGGSPVKLRKIQLAALYEDTDASTSLKYWTGLLVLYPGESYPLAKCKNIGGHGIR EEEEECCCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHCCCCCCCEE ISSYIPQRTSRLIMRINGMRYELTSPYTEGFEEYIINNINTSPGDDAIALVNEGEGGAII EECCCCCHHHEEEEEECCEEEEECCCHHHCHHHHHHHCCCCCCCCCEEEEEECCCCCEEE TSSIILYSIRMPIPVIEVEDINASRAGGQLKIIVSLMNKGESSPDFIVFTVLYKGSMLTS EEEEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEHHCCCCCCCEEEEEEEECCCEEEE MKIDKPLKSSERSISELVVPGIVKTGEPITLRIVWSKLSRTWFTEKQILVP EECCCCCCHHHHHHHHHHCCCEECCCCCEEEEEEEEHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA