| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is kbl [C]
Identifier: 218884129
GI number: 218884129
Start: 785676
End: 786866
Strand: Reverse
Name: kbl [C]
Synonym: DKAM_0818
Alternate gene names: 218884129
Gene position: 786866-785676 (Counterclockwise)
Preceding gene: 218884135
Following gene: 218884128
Centisome position: 57.64
GC content: 47.61
Gene sequence:
>1191_bases ATGGTAAAACATTGGGTAAAGGAGTACTATGGATTAAAGCTCAAAGAATTAATTGAGAGAGGAGAGATATGGGAGATAAA GAGGCTTATGGGCCCCGCTGGTCCCCGTGCTATAGTTGATGGAAGAGAGGTCATAGTGCTTGCATCCAACAATTATCTGA ATCTAGCCAATGACCCCAGGCTTAAACAGGCGGCCATCGAGGCCATGGAGAAATATGGATGGGGTCCAGGCGCGGTCTGG GCTATTGCAGGATACCATGAGATACTGGATGCTCTACACAAGAAGATAGCCGAGTTCAAGAGAACGGAGGCCGCGCTAGT CTTCCCCACAGGCTTCGCTGTGAATGCTGGCACTATTCCAGCCATAGTCGAGCAAGGAGACGTCATAGTCTCTGATGAAT TAAACCATGGAAGCATAATTGATGGTATAAGGCTTTCAAGGGCTGATAAAGTAATATATAAGCACTGTGACGTAGCAGAC CTAGAGGACAAGCTTAAGCAAGTACATGGGAAATACAAAAAGATCCTTATAATAACCGATGGAGTATTCTCAATGGACGG TGATATAGCGCCCCTGAGAGAGATAGTTAGGTTGGCGAGAGAATATAATGCAATGGTGTATGTGGATGATGCCCATGGTG AAGGGGTATTGGGAGAGGGACACGGATCCCCAGCCCATCTGGGTGTCGAGGAGGAAGTAGACTTCCACGTTGGCACGTTC TCTAAAGCCCTCGGCTCCTCAGGAGGCATGATAGGCTCAGACTATGAGGTCATAGAATTTATTAGGAACAAGGCTAGGAC ATGGCTGTTAAGCACTGGATTCCCGCCTGCAGTAGCCGCTGCCAACCTGAAGGCGCTTGAAATAGTTATGAGCGATGAAG GGAAGGAGAGGATCAGGAGGCTATGGGATAATAGAAACTACTTCAAGAAGGAGTTAGACAACCTTGGATTCAACACAGGG AAGAGCCAGACGCCCATAATACCAGTTATAATAGGTGACACTAAGAAAACACGTGAGCTAGCCAGGTCTCTCTTCGAGGA AGGAGTATTCGTCGTGCCAATAGTATACCCGATGGTTGCTAGAGGGACAGAGAGGATCAGGAATCAAGTCAATGCAGGGC ACACCAGGGAAGACCTGGATAAAGCGCTGGCAGCATATGAGAAGCATGGAAAGAGGCTTGGAATAATATAG
Upstream 100 bases:
>100_bases TGGATTGGAGTAGTTGATTTCACAATTGATACCATTTACCGTAAAAATAAAGTTATAAATAGACGGGTAAGTATAGTATA TATGTCTATGGTGGAAACAT
Downstream 100 bases:
>100_bases GGTGAACTGGTAATATGCCCCATGTACTAGTGATCGGTGCAACAGGGCAGATAGGCTCAGCACTGGTGCCGGCTCTAAGG GAGAGATACGGTAAATACAA
Product: pyridoxal phosphate-dependent acyltransferase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MVKHWVKEYYGLKLKELIERGEIWEIKRLMGPAGPRAIVDGREVIVLASNNYLNLANDPRLKQAAIEAMEKYGWGPGAVW AIAGYHEILDALHKKIAEFKRTEAALVFPTGFAVNAGTIPAIVEQGDVIVSDELNHGSIIDGIRLSRADKVIYKHCDVAD LEDKLKQVHGKYKKILIITDGVFSMDGDIAPLREIVRLAREYNAMVYVDDAHGEGVLGEGHGSPAHLGVEEEVDFHVGTF SKALGSSGGMIGSDYEVIEFIRNKARTWLLSTGFPPAVAAANLKALEIVMSDEGKERIRRLWDNRNYFKKELDNLGFNTG KSQTPIIPVIIGDTKKTRELARSLFEEGVFVVPIVYPMVARGTERIRNQVNAGHTREDLDKALAAYEKHGKRLGII
Sequences:
>Translated_396_residues MVKHWVKEYYGLKLKELIERGEIWEIKRLMGPAGPRAIVDGREVIVLASNNYLNLANDPRLKQAAIEAMEKYGWGPGAVW AIAGYHEILDALHKKIAEFKRTEAALVFPTGFAVNAGTIPAIVEQGDVIVSDELNHGSIIDGIRLSRADKVIYKHCDVAD LEDKLKQVHGKYKKILIITDGVFSMDGDIAPLREIVRLAREYNAMVYVDDAHGEGVLGEGHGSPAHLGVEEEVDFHVGTF SKALGSSGGMIGSDYEVIEFIRNKARTWLLSTGFPPAVAAANLKALEIVMSDEGKERIRRLWDNRNYFKKELDNLGFNTG KSQTPIIPVIIGDTKKTRELARSLFEEGVFVVPIVYPMVARGTERIRNQVNAGHTREDLDKALAAYEKHGKRLGII >Mature_396_residues MVKHWVKEYYGLKLKELIERGEIWEIKRLMGPAGPRAIVDGREVIVLASNNYLNLANDPRLKQAAIEAMEKYGWGPGAVW AIAGYHEILDALHKKIAEFKRTEAALVFPTGFAVNAGTIPAIVEQGDVIVSDELNHGSIIDGIRLSRADKVIYKHCDVAD LEDKLKQVHGKYKKILIITDGVFSMDGDIAPLREIVRLAREYNAMVYVDDAHGEGVLGEGHGSPAHLGVEEEVDFHVGTF SKALGSSGGMIGSDYEVIEFIRNKARTWLLSTGFPPAVAAANLKALEIVMSDEGKERIRRLWDNRNYFKKELDNLGFNTG KSQTPIIPVIIGDTKKTRELARSLFEEGVFVVPIVYPMVARGTERIRNQVNAGHTREDLDKALAAYEKHGKRLGII
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=378, Percent_Identity=38.0952380952381, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI284448556, Length=355, Percent_Identity=38.5915492957746, Blast_Score=265, Evalue=4e-71, Organism=Homo sapiens, GI4758668, Length=368, Percent_Identity=34.5108695652174, Blast_Score=211, Evalue=8e-55, Organism=Homo sapiens, GI119220554, Length=370, Percent_Identity=33.5135135135135, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI83977442, Length=348, Percent_Identity=30.4597701149425, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI83977444, Length=348, Percent_Identity=30.4597701149425, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI83977440, Length=348, Percent_Identity=30.4597701149425, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI4502025, Length=348, Percent_Identity=31.6091954022989, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI40316939, Length=348, Percent_Identity=31.6091954022989, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI5454084, Length=257, Percent_Identity=32.295719844358, Blast_Score=147, Evalue=2e-35, Organism=Escherichia coli, GI1790046, Length=362, Percent_Identity=40.6077348066298, Blast_Score=271, Evalue=6e-74, Organism=Escherichia coli, GI1786993, Length=359, Percent_Identity=34.5403899721448, Blast_Score=192, Evalue=4e-50, Organism=Caenorhabditis elegans, GI71994529, Length=359, Percent_Identity=37.883008356546, Blast_Score=251, Evalue=4e-67, Organism=Caenorhabditis elegans, GI32566772, Length=370, Percent_Identity=34.0540540540541, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17560914, Length=357, Percent_Identity=31.9327731092437, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17560912, Length=357, Percent_Identity=31.9327731092437, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI71982617, Length=275, Percent_Identity=29.0909090909091, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71982625, Length=275, Percent_Identity=29.0909090909091, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6320267, Length=365, Percent_Identity=31.7808219178082, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6320438, Length=367, Percent_Identity=30.2452316076294, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6323954, Length=260, Percent_Identity=27.6923076923077, Blast_Score=115, Evalue=1e-26, Organism=Drosophila melanogaster, GI24662918, Length=398, Percent_Identity=37.9396984924623, Blast_Score=281, Evalue=7e-76, Organism=Drosophila melanogaster, GI17137420, Length=354, Percent_Identity=34.180790960452, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI17136286, Length=369, Percent_Identity=31.9783197831978, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI24653280, Length=265, Percent_Identity=29.811320754717, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24653276, Length=265, Percent_Identity=29.811320754717, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24653278, Length=265, Percent_Identity=29.811320754717, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR010962 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 43992; Mature: 43992
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKHWVKEYYGLKLKELIERGEIWEIKRLMGPAGPRAIVDGREVIVLASNNYLNLANDPR CCHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCEEECCCEEEEEECCCEEECCCCCH LKQAAIEAMEKYGWGPGAVWAIAGYHEILDALHKKIAEFKRTEAALVFPTGFAVNAGTIP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCCCCH AIVEQGDVIVSDELNHGSIIDGIRLSRADKVIYKHCDVADLEDKLKQVHGKYKKILIITD HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEC GVFSMDGDIAPLREIVRLAREYNAMVYVDDAHGEGVLGEGHGSPAHLGVEEEVDFHVGTF CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEHHHH SKALGSSGGMIGSDYEVIEFIRNKARTWLLSTGFPPAVAAANLKALEIVMSDEGKERIRR HHHHCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHCCCEEEEEEECCCHHHHHHH LWDNRNYFKKELDNLGFNTGKSQTPIIPVIIGDTKKTRELARSLFEEGVFVVPIVYPMVA HHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHHHHH RGTERIRNQVNAGHTREDLDKALAAYEKHGKRLGII HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCC >Mature Secondary Structure MVKHWVKEYYGLKLKELIERGEIWEIKRLMGPAGPRAIVDGREVIVLASNNYLNLANDPR CCHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCEEECCCEEEEEECCCEEECCCCCH LKQAAIEAMEKYGWGPGAVWAIAGYHEILDALHKKIAEFKRTEAALVFPTGFAVNAGTIP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCCCCH AIVEQGDVIVSDELNHGSIIDGIRLSRADKVIYKHCDVADLEDKLKQVHGKYKKILIITD HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEC GVFSMDGDIAPLREIVRLAREYNAMVYVDDAHGEGVLGEGHGSPAHLGVEEEVDFHVGTF CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEHHHH SKALGSSGGMIGSDYEVIEFIRNKARTWLLSTGFPPAVAAANLKALEIVMSDEGKERIRR HHHHCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHCCCEEEEEEECCCHHHHHHH LWDNRNYFKKELDNLGFNTGKSQTPIIPVIIGDTKKTRELARSLFEEGVFVVPIVYPMVA HHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHHHHH RGTERIRNQVNAGHTREDLDKALAAYEKHGKRLGII HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA