| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884135
Identifier: 218884135
GI number: 218884135
Start: 792478
End: 792831
Strand: Reverse
Name: 218884135
Synonym: DKAM_0824
Alternate gene names: NA
Gene position: 792831-792478 (Counterclockwise)
Preceding gene: 218884136
Following gene: 218884129
Centisome position: 58.07
GC content: 40.68
Gene sequence:
>354_bases TTGGAGGAAGTAGAGAAGGCTGTCCCAATTAAGGTTGCCTCATTAAACGACCTTGTGAGACTTGCAACGTCGACGATGGT TCCACACCAGTTTAACACGTATATTATTAAGTTCAAACATGGAGGGAAGACGTATCTGGGTATGCTAGGTGTTTTCAGAG ATTATTATAAGTATTATGGAATCCCTGTATTCTACTATTATTCAACCGATATGGAGGGTATTGAGGAGGCGAACTATATT ATAGTTAGCACCAGTGATGAAAAAATAGAGTTCTCCAAGAGCCCTAGGCCAGGCATAGCTATACCTATAATATCACTTGC TGAAAAACCGGTTTTCCTACCGGATGACATCTAG
Upstream 100 bases:
>100_bases CAATAGGTATCCTTAAATTTGTGTCAGGACAATTAAGAAGACTGGAAAAATAAAGGAATATCCGGGATAATATCGGGGAA AACTGGTGTAGGTGTCCACT
Downstream 100 bases:
>100_bases CGGGGACGGATGATAAGTCTCTTACCCATTACGACCCAGTATTCTACCTCTGAGCCTACTCCCAGCTTGTTTCTAATATC CTCCTCTATGGAGTCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MEEVEKAVPIKVASLNDLVRLATSTMVPHQFNTYIIKFKHGGKTYLGMLGVFRDYYKYYGIPVFYYYSTDMEGIEEANYI IVSTSDEKIEFSKSPRPGIAIPIISLAEKPVFLPDDI
Sequences:
>Translated_117_residues MEEVEKAVPIKVASLNDLVRLATSTMVPHQFNTYIIKFKHGGKTYLGMLGVFRDYYKYYGIPVFYYYSTDMEGIEEANYI IVSTSDEKIEFSKSPRPGIAIPIISLAEKPVFLPDDI >Mature_117_residues MEEVEKAVPIKVASLNDLVRLATSTMVPHQFNTYIIKFKHGGKTYLGMLGVFRDYYKYYGIPVFYYYSTDMEGIEEANYI IVSTSDEKIEFSKSPRPGIAIPIISLAEKPVFLPDDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13339; Mature: 13339
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEVEKAVPIKVASLNDLVRLATSTMVPHQFNTYIIKFKHGGKTYLGMLGVFRDYYKYYG CCCCHHHCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC IPVFYYYSTDMEGIEEANYIIVSTSDEKIEFSKSPRPGIAIPIISLAEKPVFLPDDI CEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MEEVEKAVPIKVASLNDLVRLATSTMVPHQFNTYIIKFKHGGKTYLGMLGVFRDYYKYYG CCCCHHHCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC IPVFYYYSTDMEGIEEANYIIVSTSDEKIEFSKSPRPGIAIPIISLAEKPVFLPDDI CEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA