Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884058
Identifier: 218884058
GI number: 218884058
Start: 718365
End: 720035
Strand: Reverse
Name: 218884058
Synonym: DKAM_0747
Alternate gene names: NA
Gene position: 720035-718365 (Counterclockwise)
Preceding gene: 218884060
Following gene: 218884055
Centisome position: 52.74
GC content: 44.52
Gene sequence:
>1671_bases ATGGGTGAGGAGGGATATATTGATCAACTACTTGATTTCCTGCGATCAAGGAGCTTTCACAATGGGGAGGCTTCAATAAT ACCTGTCTTAACTCATCCCTGGAACGTGGCCAGTGTAGTTAATAGGCTCAGCGAGGAGCTAGGGATATTGGACTTTATTA TTTTAACCAGGAAAGAACTAGTCGATGACGTGTATCAATCGCTTTCCCAGGAACCCGCCCTCACCAGTGAACTAAATATA TACGTGGATCACATGTATGTGAAAAGCATATTGCATGACAGCGTATTCGATAACGCCGTAAGGCTTCAGTACTTTATAAA TAATATTAGCGATAGAATCAGGAGAATATATATAGATTTAACCCTCACAACCGGCCCATTCGCGGTAACGCTTCAAGGAG TTTTTAGTAAGACAGGGAGTCACCCGATAATATATACCTACGTGGATACTATACCGTTACCTGGGCTCCCGCAATATCCT AGTAGCCCTAGATGGATGCATAGGGTGTATGTCTATGATGATGAGTCTCATCCTTTAGAGACCAAGCATGGTGGAACCGG GGATAAAACGCTCTCAGCCACTATTTCCGGTAAAATAATGTGGAAGGGAACGCGCGGTATATTCGAGGATATCTCCAGAA TCATGAATAAGTTAATAGATGTCAGGTTGATGGAGAAGATAAGTGGTGAATTCAGGGAGGATATCCCAGAGTCCTCTCCA GTGCTTGTGGTGAACGCTTTGAACTCTGTGAACGGAGAGAGAAAGAAGATTATATCGCTTAAACTGATCGAGGGACCCGA TGAGGATTCAGTCAATATGATGATGAGTAACTGGAAAATACTGTCGGAACTAGTCTATGAACTCCACCAGGACGCTGATA AGTCATCCATTGAGAGGATACTAATGCAGTTCCAGAGATATACTGGTGCAGTTGACCTAATAGCTAGGGAGCTCGAGGGG CAGAATGCCAGAGACTATGAGGGCTGGAAGATGCACAGCCTCCTAGTAGATATGTATAGGAGGCTTAGAAGACCCATAGC CCTACTCCCCGACACCAATATGTTCTACCAGGGGCTACATATGACACTGTTGAAGGCTAGTATTAAAAACGGGAAGCCAT GGAACCCCATCGATGGTGTCAGGATATATATACCTGTCTGTGCTGAGGCCGAGATAAACGGGAAAGTGGCAGGGGTTTCA AGCGAGACAACCGGAATCTCTAAGTACTCTTATATAATGGCTTTGCTTGCCAATAGAGCTATAGATGAGATCAAACAGTA TTACAAGGGAGTACATCTGCCTGCTGTGAGCCAGCCTTGCGAGGCCTCAATAGCTGTGGTGGAACAGGGTTTAAGTGAGG AAAGGATAATACTGGTAACAGCGGATAAGAAAGCATATAATGCATGGGTAACCCTGAATGTCTGTAGGGACAGGGTTATA TGTATATACGTGGGACACAGGAATAAGCCGTTGAACATAGATGGATTGTACTCTAAATTCTATGCTAGCATTGTGCTGGC AAGCCAGATTTACGTGGCTAGCTCTATAATCCCTCTAGAGCTCTCTATGGATAATAAAAGGATCCGCATGGTGCTTGAAA CACTCCAAGGTGCTGGGGCCCCGGTATTAAACATTATTGAGGAACCTACTTCGTACCATAGAGCAAGTTGA
Upstream 100 bases:
>100_bases CACCCGGTTATCCTTTACTGTGTCATAGAATATTGCTCCAAGTATTTAATCCGTGAGCTATAATAATCTTTAATGGTTTG AACCGAGGGTTGATTGTTTC
Downstream 100 bases:
>100_bases TCAGTCATGGGAAACTATGAGGAGATGTTGGGAGCATGGAGAAAGCGGTTCTCTACCCACTGCTCTCCCTAATAACATGG CGTCTTGGGTCTAGTGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MGEEGYIDQLLDFLRSRSFHNGEASIIPVLTHPWNVASVVNRLSEELGILDFIILTRKELVDDVYQSLSQEPALTSELNI YVDHMYVKSILHDSVFDNAVRLQYFINNISDRIRRIYIDLTLTTGPFAVTLQGVFSKTGSHPIIYTYVDTIPLPGLPQYP SSPRWMHRVYVYDDESHPLETKHGGTGDKTLSATISGKIMWKGTRGIFEDISRIMNKLIDVRLMEKISGEFREDIPESSP VLVVNALNSVNGERKKIISLKLIEGPDEDSVNMMMSNWKILSELVYELHQDADKSSIERILMQFQRYTGAVDLIARELEG QNARDYEGWKMHSLLVDMYRRLRRPIALLPDTNMFYQGLHMTLLKASIKNGKPWNPIDGVRIYIPVCAEAEINGKVAGVS SETTGISKYSYIMALLANRAIDEIKQYYKGVHLPAVSQPCEASIAVVEQGLSEERIILVTADKKAYNAWVTLNVCRDRVI CIYVGHRNKPLNIDGLYSKFYASIVLASQIYVASSIIPLELSMDNKRIRMVLETLQGAGAPVLNIIEEPTSYHRAS
Sequences:
>Translated_556_residues MGEEGYIDQLLDFLRSRSFHNGEASIIPVLTHPWNVASVVNRLSEELGILDFIILTRKELVDDVYQSLSQEPALTSELNI YVDHMYVKSILHDSVFDNAVRLQYFINNISDRIRRIYIDLTLTTGPFAVTLQGVFSKTGSHPIIYTYVDTIPLPGLPQYP SSPRWMHRVYVYDDESHPLETKHGGTGDKTLSATISGKIMWKGTRGIFEDISRIMNKLIDVRLMEKISGEFREDIPESSP VLVVNALNSVNGERKKIISLKLIEGPDEDSVNMMMSNWKILSELVYELHQDADKSSIERILMQFQRYTGAVDLIARELEG QNARDYEGWKMHSLLVDMYRRLRRPIALLPDTNMFYQGLHMTLLKASIKNGKPWNPIDGVRIYIPVCAEAEINGKVAGVS SETTGISKYSYIMALLANRAIDEIKQYYKGVHLPAVSQPCEASIAVVEQGLSEERIILVTADKKAYNAWVTLNVCRDRVI CIYVGHRNKPLNIDGLYSKFYASIVLASQIYVASSIIPLELSMDNKRIRMVLETLQGAGAPVLNIIEEPTSYHRAS >Mature_555_residues GEEGYIDQLLDFLRSRSFHNGEASIIPVLTHPWNVASVVNRLSEELGILDFIILTRKELVDDVYQSLSQEPALTSELNIY VDHMYVKSILHDSVFDNAVRLQYFINNISDRIRRIYIDLTLTTGPFAVTLQGVFSKTGSHPIIYTYVDTIPLPGLPQYPS SPRWMHRVYVYDDESHPLETKHGGTGDKTLSATISGKIMWKGTRGIFEDISRIMNKLIDVRLMEKISGEFREDIPESSPV LVVNALNSVNGERKKIISLKLIEGPDEDSVNMMMSNWKILSELVYELHQDADKSSIERILMQFQRYTGAVDLIARELEGQ NARDYEGWKMHSLLVDMYRRLRRPIALLPDTNMFYQGLHMTLLKASIKNGKPWNPIDGVRIYIPVCAEAEINGKVAGVSS ETTGISKYSYIMALLANRAIDEIKQYYKGVHLPAVSQPCEASIAVVEQGLSEERIILVTADKKAYNAWVTLNVCRDRVIC IYVGHRNKPLNIDGLYSKFYASIVLASQIYVASSIIPLELSMDNKRIRMVLETLQGAGAPVLNIIEEPTSYHRAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62922; Mature: 62791
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEEGYIDQLLDFLRSRSFHNGEASIIPVLTHPWNVASVVNRLSEELGILDFIILTRKEL CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VDDVYQSLSQEPALTSELNIYVDHMYVKSILHDSVFDNAVRLQYFINNISDRIRRIYIDL HHHHHHHHCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEEE TLTTGPFAVTLQGVFSKTGSHPIIYTYVDTIPLPGLPQYPSSPRWMHRVYVYDDESHPLE EEECCCEEEEEEHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCC TKHGGTGDKTLSATISGKIMWKGTRGIFEDISRIMNKLIDVRLMEKISGEFREDIPESSP CCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC VLVVNALNSVNGERKKIISLKLIEGPDEDSVNMMMSNWKILSELVYELHQDADKSSIERI EEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LMQFQRYTGAVDLIARELEGQNARDYEGWKMHSLLVDMYRRLRRPIALLPDTNMFYQGLH HHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHH MTLLKASIKNGKPWNPIDGVRIYIPVCAEAEINGKVAGVSSETTGISKYSYIMALLANRA HHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH IDEIKQYYKGVHLPAVSQPCEASIAVVEQGLSEERIILVTADKKAYNAWVTLNVCRDRVI HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCEE CIYVGHRNKPLNIDGLYSKFYASIVLASQIYVASSIIPLELSMDNKRIRMVLETLQGAGA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCC PVLNIIEEPTSYHRAS CHHHHHHCCCHHCCCC >Mature Secondary Structure GEEGYIDQLLDFLRSRSFHNGEASIIPVLTHPWNVASVVNRLSEELGILDFIILTRKEL CCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VDDVYQSLSQEPALTSELNIYVDHMYVKSILHDSVFDNAVRLQYFINNISDRIRRIYIDL HHHHHHHHCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEEE TLTTGPFAVTLQGVFSKTGSHPIIYTYVDTIPLPGLPQYPSSPRWMHRVYVYDDESHPLE EEECCCEEEEEEHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCC TKHGGTGDKTLSATISGKIMWKGTRGIFEDISRIMNKLIDVRLMEKISGEFREDIPESSP CCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC VLVVNALNSVNGERKKIISLKLIEGPDEDSVNMMMSNWKILSELVYELHQDADKSSIERI EEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LMQFQRYTGAVDLIARELEGQNARDYEGWKMHSLLVDMYRRLRRPIALLPDTNMFYQGLH HHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHH MTLLKASIKNGKPWNPIDGVRIYIPVCAEAEINGKVAGVSSETTGISKYSYIMALLANRA HHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH IDEIKQYYKGVHLPAVSQPCEASIAVVEQGLSEERIILVTADKKAYNAWVTLNVCRDRVI HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCEE CIYVGHRNKPLNIDGLYSKFYASIVLASQIYVASSIIPLELSMDNKRIRMVLETLQGAGA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCC PVLNIIEEPTSYHRAS CHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA