Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884060
Identifier: 218884060
GI number: 218884060
Start: 720832
End: 721560
Strand: Reverse
Name: 218884060
Synonym: DKAM_0749
Alternate gene names: NA
Gene position: 721560-720832 (Counterclockwise)
Preceding gene: 218884065
Following gene: 218884058
Centisome position: 52.85
GC content: 44.86
Gene sequence:
>729_bases GTGGTTTACATGGAGGATAAGCCACGAGTTTTAATAATTAATGCTTCGCCGCGTAAATATGGGTCTTCAATGCAGTTATC CGTGGTGGCTTCGAAAGGAGTGATAGATGCTGGAGGTATACCAGAGATAATCAGCCTATACGACTACAAGATAAAGCCCT GCATAGGGTGTGTGTCGGATGGTAATAAATACTGTAGGTTTCCCTGTGTAATTAAGGATGACGACTTCAACTCGCTGGCA GAGAAGCTCCTGAACTCCCATGGATTCATAATATCTACGCCAGTATATTGGTATGCCCCAAGCGGCGTCCTAAAAAACTT TATTGATAGGCTGACAAGTATGGAGCACATGATATTCCACAAGGGTAGAAGCCTGTTGGAGGGTAAGGTCGCAGGGTTCA TTGCCACAGGTCTCGACAGCGGAGTAATGATGGCTATATCATATCTAGCCATAGTAATGAGTAGTATGGGTGTACACATT ATCCCATGGAGTATGGCGTACAGCCACCTAGATGACGTCACCAGGGATGAGCAGGCCCTAAGAGACTCCTATAACGTGGG ATATATCGTGGCTAAGACCGCGAGGGCCCTGATGAATTATGAGTACATAGGGTATAATCCATCAGTTAACATAGTTGAAT TAGCTGAACTAGCTCGTAAATACGCTATTGCAGAGTCAGCTGAGAGGGAGGAAAGAATTAGGAACCTTGAAAGCCTTCTG AATGGTTAA
Upstream 100 bases:
>100_bases TCTCCGCATCTTTTACGCCATGTCTCAATAATTGTCATGGAATTTATTTTTAATAATTGTTCGAAGTATTAAACATTACT CTATGGTGTGATCTAACCAG
Downstream 100 bases:
>100_bases CAATACTTGTTTTTTATCCTCTCGATAATCCTGCTAGAGCTCCACTCGCCTATCCTTGACTCCAGCTTCTCAACCCTCAC GTTACTTAGCCCCTTTTTCT
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Iron-Sulfur Flavoprotein; Multimeric Flavodoxin WrbA-Like; Redox-Active Protein; NAD(P)H DehydrogenaseNADPH-Dependent FMN Reductase; Multimeric Flavodoxin WrbA; Flavodoxin 2 Family Protein; Multimeric Flavodoxin Domain-Containing Protein; NAD(P)H Dehydrogenase; Multimeric Flavodoxin WrbA Family Protein
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MVYMEDKPRVLIINASPRKYGSSMQLSVVASKGVIDAGGIPEIISLYDYKIKPCIGCVSDGNKYCRFPCVIKDDDFNSLA EKLLNSHGFIISTPVYWYAPSGVLKNFIDRLTSMEHMIFHKGRSLLEGKVAGFIATGLDSGVMMAISYLAIVMSSMGVHI IPWSMAYSHLDDVTRDEQALRDSYNVGYIVAKTARALMNYEYIGYNPSVNIVELAELARKYAIAESAEREERIRNLESLL NG
Sequences:
>Translated_242_residues MVYMEDKPRVLIINASPRKYGSSMQLSVVASKGVIDAGGIPEIISLYDYKIKPCIGCVSDGNKYCRFPCVIKDDDFNSLA EKLLNSHGFIISTPVYWYAPSGVLKNFIDRLTSMEHMIFHKGRSLLEGKVAGFIATGLDSGVMMAISYLAIVMSSMGVHI IPWSMAYSHLDDVTRDEQALRDSYNVGYIVAKTARALMNYEYIGYNPSVNIVELAELARKYAIAESAEREERIRNLESLL NG >Mature_242_residues MVYMEDKPRVLIINASPRKYGSSMQLSVVASKGVIDAGGIPEIISLYDYKIKPCIGCVSDGNKYCRFPCVIKDDDFNSLA EKLLNSHGFIISTPVYWYAPSGVLKNFIDRLTSMEHMIFHKGRSLLEGKVAGFIATGLDSGVMMAISYLAIVMSSMGVHI IPWSMAYSHLDDVTRDEQALRDSYNVGYIVAKTARALMNYEYIGYNPSVNIVELAELARKYAIAESAEREERIRNLESLL NG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26972; Mature: 26972
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYMEDKPRVLIINASPRKYGSSMQLSVVASKGVIDAGGIPEIISLYDYKIKPCIGCVSD CCEECCCCEEEEEECCCHHHCCCEEEEEEEECCEECCCCCHHHHHHHCCCCCHHEEECCC GNKYCRFPCVIKDDDFNSLAEKLLNSHGFIISTPVYWYAPSGVLKNFIDRLTSMEHMIFH CCCEEEEEEEEECCCHHHHHHHHHHCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHH KGRSLLEGKVAGFIATGLDSGVMMAISYLAIVMSSMGVHIIPWSMAYSHLDDVTRDEQAL HCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHH RDSYNVGYIVAKTARALMNYEYIGYNPSVNIVELAELARKYAIAESAEREERIRNLESLL HHCCCCCEEHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NG CC >Mature Secondary Structure MVYMEDKPRVLIINASPRKYGSSMQLSVVASKGVIDAGGIPEIISLYDYKIKPCIGCVSD CCEECCCCEEEEEECCCHHHCCCEEEEEEEECCEECCCCCHHHHHHHCCCCCHHEEECCC GNKYCRFPCVIKDDDFNSLAEKLLNSHGFIISTPVYWYAPSGVLKNFIDRLTSMEHMIFH CCCEEEEEEEEECCCHHHHHHHHHHCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHH KGRSLLEGKVAGFIATGLDSGVMMAISYLAIVMSSMGVHIIPWSMAYSHLDDVTRDEQAL HCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHH RDSYNVGYIVAKTARALMNYEYIGYNPSVNIVELAELARKYAIAESAEREERIRNLESLL HHCCCCCEEHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA