Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884035
Identifier: 218884035
GI number: 218884035
Start: 696092
End: 696520
Strand: Reverse
Name: 218884035
Synonym: DKAM_0724
Alternate gene names: NA
Gene position: 696520-696092 (Counterclockwise)
Preceding gene: 218884036
Following gene: 218884034
Centisome position: 51.02
GC content: 50.12
Gene sequence:
>429_bases GTGCCCGATAACCTGAGCACGGTGTTGATGAGAGAGGCCTCGGCTGACCAGTGCCCTAACCCGTTAATAAGGGATTTCAA GGAGCAGGATTTAGATGAGGTCGTGGAGATAGATAAGGAGTGTTTCGGGGAGCTCGTACGCTATGATGGAGGCGTCTTCG AGTCCATACCCGGCGAACACGATGGCAGTATCATTTTCTATGTTGCTGCATGTAATAATGGGTTAGGGTTTAGATCTTAT ATAGGCTTATTTAAATTGGTTTCATCCCTTCATCCTTGTTCCCCCTGTATCCCCTTTGGGCTTGCATACGGCTTAGGGGT GTTCGCGGGCACCCTACATCTTGAATTAAGGGATAGGGTAGCATGCCACCCCATCCCTGTCTCCGGTGAGCCCGTGCTCC GGTTATTTGATGATCCTGTGGTCTTCTAG
Upstream 100 bases:
>100_bases TAGACTCGATGGATTTAAACCCGGTGATAGCATACCCTGATAAAGCTGTAGTGGTTGATGCTAGGATAATAGTACGCAGG TAGATTGCCCTTAGTGATGA
Downstream 100 bases:
>100_bases AATCAGCTCCGCCCCCTTATCCCGAGTTTTTCGGGAAGATGAAACATCTACATGGCAAAAATTATGCAATAATATAATAA TAGCAGAAGACTAACACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPDNLSTVLMREASADQCPNPLIRDFKEQDLDEVVEIDKECFGELVRYDGGVFESIPGEHDGSIIFYVAACNNGLGFRSY IGLFKLVSSLHPCSPCIPFGLAYGLGVFAGTLHLELRDRVACHPIPVSGEPVLRLFDDPVVF
Sequences:
>Translated_142_residues MPDNLSTVLMREASADQCPNPLIRDFKEQDLDEVVEIDKECFGELVRYDGGVFESIPGEHDGSIIFYVAACNNGLGFRSY IGLFKLVSSLHPCSPCIPFGLAYGLGVFAGTLHLELRDRVACHPIPVSGEPVLRLFDDPVVF >Mature_141_residues PDNLSTVLMREASADQCPNPLIRDFKEQDLDEVVEIDKECFGELVRYDGGVFESIPGEHDGSIIFYVAACNNGLGFRSYI GLFKLVSSLHPCSPCIPFGLAYGLGVFAGTLHLELRDRVACHPIPVSGEPVLRLFDDPVVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15618; Mature: 15487
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNLSTVLMREASADQCPNPLIRDFKEQDLDEVVEIDKECFGELVRYDGGVFESIPGEH CCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DGSIIFYVAACNNGLGFRSYIGLFKLVSSLHPCSPCIPFGLAYGLGVFAGTLHLELRDRV CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCC ACHPIPVSGEPVLRLFDDPVVF CCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure PDNLSTVLMREASADQCPNPLIRDFKEQDLDEVVEIDKECFGELVRYDGGVFESIPGEH CCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DGSIIFYVAACNNGLGFRSYIGLFKLVSSLHPCSPCIPFGLAYGLGVFAGTLHLELRDRV CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCC ACHPIPVSGEPVLRLFDDPVVF CCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA