Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is yfiQ [C]

Identifier: 218884036

GI number: 218884036

Start: 696538

End: 697236

Strand: Reverse

Name: yfiQ [C]

Synonym: DKAM_0725

Alternate gene names: 218884036

Gene position: 697236-696538 (Counterclockwise)

Preceding gene: 218884042

Following gene: 218884035

Centisome position: 51.07

GC content: 48.5

Gene sequence:

>699_bases
ATGCCTGGAAAACAAGCTGTTTCAGTCTCTAGTGTGATTGGTGGAGAGGGTAAGCTATCTGATTTAAAGGTTTTCCATAT
CCTCGAATCATATAATATACCTCTAGCATCATACGGGTTCGCATCAACTCCGGGGGAAGCCGTTGAGATAGCTGAGAAGA
TAGGTTACCCAGTGGTTGTCAAGGTGGTTTCACCCGATATAAGCCATAAGAGCGATGTCGGGGGCGTTAGACTGGGTTTG
ACGAGTAGTAGTGAGGTATACAGAGCTGTCGAAGAGATGAACAGGGTTATCCAGGTTAAGGCGCCGGGTGCTAGGATTGA
GGGATTCCTAGTGCAGAAGATGATGCCTAAGGGTGTCGAGGTAATCATTGGCTCACTTAATGACGCGGTCTTCGGCGGTG
TCGTGATGTTCGGCCTTGGCGGTATCTTCACAGAGGTCTTCAGGGATGTCTCATTCAGGGTAGCACCAATAGATGTCAGG
GAGGCGTTGGAGATGATCGAGGAGCTGAGGGCGTCCAGTATATTCAACGGGTACCGCGGCATACCCCCAGTTAATAAGCA
TGCGTTGGCTGATATATTGGTTAAGGTATCCCGCCTGATAATAGAGAATCCCTGGATAGACTCGATGGATTTAAACCCGG
TGATAGCATACCCTGATAAAGCTGTAGTGGTTGATGCTAGGATAATAGTACGCAGGTAG

Upstream 100 bases:

>100_bases
CTGCTCAGACCCCCTGTTCATCACTCCCAGAATCTCCGGTATATATTTTATATATGGATATGTTTATAAGCAGGAACGTA
TATAAGACAGTCAGGGCTAA

Downstream 100 bases:

>100_bases
ATTGCCCTTAGTGATGAGTGCCCGATAACCTGAGCACGGTGTTGATGAGAGAGGCCTCGGCTGACCAGTGCCCTAACCCG
TTAATAAGGGATTTCAAGGA

Product: Branched-chain acyl-CoA synthetase subunit beta / acetyl-CoA synthetase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MPGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVVKVVSPDISHKSDVGGVRLGL
TSSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVEVIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVR
EALEMIEELRASSIFNGYRGIPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR

Sequences:

>Translated_232_residues
MPGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVVKVVSPDISHKSDVGGVRLGL
TSSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVEVIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVR
EALEMIEELRASSIFNGYRGIPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR
>Mature_231_residues
PGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVVKVVSPDISHKSDVGGVRLGLT
SSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVEVIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVRE
ALEMIEELRASSIFNGYRGIPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=220, Percent_Identity=31.3636363636364, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 25106; Mature: 24974

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVV
CCCCHHEEHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEE
KVVSPDISHKSDVGGVRLGLTSSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVE
EEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCE
VIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVREALEMIEELRASSIFNGYRG
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCC
IPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEEEEC
>Mature Secondary Structure 
PGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVV
CCCHHEEHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEE
KVVSPDISHKSDVGGVRLGLTSSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVE
EEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCE
VIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVREALEMIEELRASSIFNGYRG
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCC
IPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]