Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is yfiQ [C]
Identifier: 218884036
GI number: 218884036
Start: 696538
End: 697236
Strand: Reverse
Name: yfiQ [C]
Synonym: DKAM_0725
Alternate gene names: 218884036
Gene position: 697236-696538 (Counterclockwise)
Preceding gene: 218884042
Following gene: 218884035
Centisome position: 51.07
GC content: 48.5
Gene sequence:
>699_bases ATGCCTGGAAAACAAGCTGTTTCAGTCTCTAGTGTGATTGGTGGAGAGGGTAAGCTATCTGATTTAAAGGTTTTCCATAT CCTCGAATCATATAATATACCTCTAGCATCATACGGGTTCGCATCAACTCCGGGGGAAGCCGTTGAGATAGCTGAGAAGA TAGGTTACCCAGTGGTTGTCAAGGTGGTTTCACCCGATATAAGCCATAAGAGCGATGTCGGGGGCGTTAGACTGGGTTTG ACGAGTAGTAGTGAGGTATACAGAGCTGTCGAAGAGATGAACAGGGTTATCCAGGTTAAGGCGCCGGGTGCTAGGATTGA GGGATTCCTAGTGCAGAAGATGATGCCTAAGGGTGTCGAGGTAATCATTGGCTCACTTAATGACGCGGTCTTCGGCGGTG TCGTGATGTTCGGCCTTGGCGGTATCTTCACAGAGGTCTTCAGGGATGTCTCATTCAGGGTAGCACCAATAGATGTCAGG GAGGCGTTGGAGATGATCGAGGAGCTGAGGGCGTCCAGTATATTCAACGGGTACCGCGGCATACCCCCAGTTAATAAGCA TGCGTTGGCTGATATATTGGTTAAGGTATCCCGCCTGATAATAGAGAATCCCTGGATAGACTCGATGGATTTAAACCCGG TGATAGCATACCCTGATAAAGCTGTAGTGGTTGATGCTAGGATAATAGTACGCAGGTAG
Upstream 100 bases:
>100_bases CTGCTCAGACCCCCTGTTCATCACTCCCAGAATCTCCGGTATATATTTTATATATGGATATGTTTATAAGCAGGAACGTA TATAAGACAGTCAGGGCTAA
Downstream 100 bases:
>100_bases ATTGCCCTTAGTGATGAGTGCCCGATAACCTGAGCACGGTGTTGATGAGAGAGGCCTCGGCTGACCAGTGCCCTAACCCG TTAATAAGGGATTTCAAGGA
Product: Branched-chain acyl-CoA synthetase subunit beta / acetyl-CoA synthetase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MPGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVVKVVSPDISHKSDVGGVRLGL TSSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVEVIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVR EALEMIEELRASSIFNGYRGIPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR
Sequences:
>Translated_232_residues MPGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVVKVVSPDISHKSDVGGVRLGL TSSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVEVIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVR EALEMIEELRASSIFNGYRGIPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR >Mature_231_residues PGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVVKVVSPDISHKSDVGGVRLGLT SSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVEVIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVRE ALEMIEELRASSIFNGYRGIPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=220, Percent_Identity=31.3636363636364, Blast_Score=109, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 25106; Mature: 24974
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVV CCCCHHEEHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEE KVVSPDISHKSDVGGVRLGLTSSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVE EEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCE VIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVREALEMIEELRASSIFNGYRG EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCC IPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEEEEC >Mature Secondary Structure PGKQAVSVSSVIGGEGKLSDLKVFHILESYNIPLASYGFASTPGEAVEIAEKIGYPVVV CCCHHEEHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEE KVVSPDISHKSDVGGVRLGLTSSSEVYRAVEEMNRVIQVKAPGARIEGFLVQKMMPKGVE EEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCE VIIGSLNDAVFGGVVMFGLGGIFTEVFRDVSFRVAPIDVREALEMIEELRASSIFNGYRG EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCC IPPVNKHALADILVKVSRLIIENPWIDSMDLNPVIAYPDKAVVVDARIIVRR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]