| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is hmgA [H]
Identifier: 218884031
GI number: 218884031
Start: 692469
End: 693752
Strand: Direct
Name: hmgA [H]
Synonym: DKAM_0720
Alternate gene names: 218884031
Gene position: 692469-693752 (Clockwise)
Preceding gene: 218884028
Following gene: 218884032
Centisome position: 50.72
GC content: 51.79
Gene sequence:
>1284_bases ATGGAGAAGACAAGCCGTATACAGGGCTTCTACAAGCTTCCCCTTGAAGAAAGACGGAGGATAGTCTGCGAGTGGGCTGG GCTAACAGAGGAAGAGTGCAGGACACTGAGCGAATTCGGTAATCTACCAGTTAAGATAGGGGACAGCATGATTGAGAACG TTATAGGCGCGATGAGCTATCCCTTCGCAGTAGCGACAAACTTCCTGATCAATGGGAGGGATTACCTTGTCCCAATGGTT ATAGAGGAGACAAGCGTCGTAGCGGCTGCAAGCAATGCGGCCAGGATGCTTAGGCATGGGAAAGGGATACTTGCAAATGC TGAGAGACAGGAGATGATCAGCCAAATACACCTGGTTAAAGTAAACTCCCCACGCTTTAAAGCCATGAAGATTATCGAGG CCAAGAAGGAGCTACTGGACTACGCGGCACAGCAGGATCCAACCCTGCTAAAGTACGGCGGGGGTCCCAGGGACCTCGAG GTAAGAGCAATGGAGCACCCTGCTTTAGGCGGGGTCATAATAGTCCACCTAGTAGTAGACGTCAGAGACGCCATGGGTGC TAACACTGTTAACACGATGGCTGAAGCGATAGCCCCGCTTCTAGAGAAGATAACGGGTGGGGAAGCAAGGCTCAGAATAG TTTCAAACCACGCAGTATACAGGGTTACACGGGCATGGGCTGCGACACCTGTCGAAGAAGTGGGAGGCCTTGAAGTAGCC AGGAGGATAATGGAGGCATCTATACTCGCCGAGATAGATCCCTATAGGGCGGTAACCCATAACAAGGGCATAATGAATGG AGTAATAGCAGTAGCCCTCGCGACGGGACAGGATCACCGCGCCATAGAGGCTGGAGCCCATGCATACGCCTCTAGAACGG GGGTCTACAAGCCCCTCAGCTACTGGGAGGTAACAAGCGATAACTATCTTGCGGGAAGCCTTGAGATACCTCTCCAAATA GGCGTTGTTGGAGGAGCAGTCAAGGTACACCCTGTGGCAAAGATAGCATTGAAGATCCTAGGGGTAAACACGGCTAGGGA GCTCGCCGAGGTAATGGCTGCGGTAGGGCTAGCCCAGAACCTAGCCGCTCTAAGAGCCCTCGTGACAGAGGGTATTCAGA AAGGCCATATGAGGCTCCACGCCAGAAACCTCGCTATAATGGCTGGTGCATCAGGAGATCTAATAGATAAGATAGCCGAG AAAATGATCAGGGACGGTAGAATAAGATACGACTACGCTAAACAACTAGTAGAGAAAGCACTACAGGGCGAGCCATTAGA CTAG
Upstream 100 bases:
>100_bases TATTGACTCTGCGAGAGCCCACTCGTGAACCATGACTCTACACCACTCGCTCTGTATTTATTTTATTTCTACATAATATA GTTACCTATGGTGTGTATAC
Downstream 100 bases:
>100_bases TTTTCTCCTTATCCACTTGTATACATTTTTAAAGGTGTACCAGCTCTAGATGTGGTTTCCTACGTTATTTCCACAAACTT CTGCTTCTTAAGAAGCGTAT
Product: hydroxymethylglutaryl-CoA reductase
Products: NA
Alternate protein names: HMG-CoA reductase [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MEKTSRIQGFYKLPLEERRRIVCEWAGLTEEECRTLSEFGNLPVKIGDSMIENVIGAMSYPFAVATNFLINGRDYLVPMV IEETSVVAAASNAARMLRHGKGILANAERQEMISQIHLVKVNSPRFKAMKIIEAKKELLDYAAQQDPTLLKYGGGPRDLE VRAMEHPALGGVIIVHLVVDVRDAMGANTVNTMAEAIAPLLEKITGGEARLRIVSNHAVYRVTRAWAATPVEEVGGLEVA RRIMEASILAEIDPYRAVTHNKGIMNGVIAVALATGQDHRAIEAGAHAYASRTGVYKPLSYWEVTSDNYLAGSLEIPLQI GVVGGAVKVHPVAKIALKILGVNTARELAEVMAAVGLAQNLAALRALVTEGIQKGHMRLHARNLAIMAGASGDLIDKIAE KMIRDGRIRYDYAKQLVEKALQGEPLD
Sequences:
>Translated_427_residues MEKTSRIQGFYKLPLEERRRIVCEWAGLTEEECRTLSEFGNLPVKIGDSMIENVIGAMSYPFAVATNFLINGRDYLVPMV IEETSVVAAASNAARMLRHGKGILANAERQEMISQIHLVKVNSPRFKAMKIIEAKKELLDYAAQQDPTLLKYGGGPRDLE VRAMEHPALGGVIIVHLVVDVRDAMGANTVNTMAEAIAPLLEKITGGEARLRIVSNHAVYRVTRAWAATPVEEVGGLEVA RRIMEASILAEIDPYRAVTHNKGIMNGVIAVALATGQDHRAIEAGAHAYASRTGVYKPLSYWEVTSDNYLAGSLEIPLQI GVVGGAVKVHPVAKIALKILGVNTARELAEVMAAVGLAQNLAALRALVTEGIQKGHMRLHARNLAIMAGASGDLIDKIAE KMIRDGRIRYDYAKQLVEKALQGEPLD >Mature_427_residues MEKTSRIQGFYKLPLEERRRIVCEWAGLTEEECRTLSEFGNLPVKIGDSMIENVIGAMSYPFAVATNFLINGRDYLVPMV IEETSVVAAASNAARMLRHGKGILANAERQEMISQIHLVKVNSPRFKAMKIIEAKKELLDYAAQQDPTLLKYGGGPRDLE VRAMEHPALGGVIIVHLVVDVRDAMGANTVNTMAEAIAPLLEKITGGEARLRIVSNHAVYRVTRAWAATPVEEVGGLEVA RRIMEASILAEIDPYRAVTHNKGIMNGVIAVALATGQDHRAIEAGAHAYASRTGVYKPLSYWEVTSDNYLAGSLEIPLQI GVVGGAVKVHPVAKIALKILGVNTARELAEVMAAVGLAQNLAALRALVTEGIQKGHMRLHARNLAIMAGASGDLIDKIAE KMIRDGRIRYDYAKQLVEKALQGEPLD
Specific function: Converts HMG-CoA to mevalonate [H]
COG id: COG1257
COG function: function code I; Hydroxymethylglutaryl-CoA reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HMG-CoA reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002202 - InterPro: IPR004553 - InterPro: IPR023074 - InterPro: IPR023076 - InterPro: IPR009023 - InterPro: IPR009029 [H]
Pfam domain/function: PF00368 HMG-CoA_red [H]
EC number: =1.1.1.34 [H]
Molecular weight: Translated: 46450; Mature: 46450
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00066 HMG_COA_REDUCTASE_1 ; PS01192 HMG_COA_REDUCTASE_3 ; PS50065 HMG_COA_REDUCTASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTSRIQGFYKLPLEERRRIVCEWAGLTEEECRTLSEFGNLPVKIGDSMIENVIGAMSY CCCCHHCCCCEECCHHHCCEEEEHCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHCC PFAVATNFLINGRDYLVPMVIEETSVVAAASNAARMLRHGKGILANAERQEMISQIHLVK CHHHHHHHEECCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEE VNSPRFKAMKIIEAKKELLDYAAQQDPTLLKYGGGPRDLEVRAMEHPALGGVIIVHLVVD ECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHH VRDAMGANTVNTMAEAIAPLLEKITGGEARLRIVSNHAVYRVTRAWAATPVEEVGGLEVA HHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEHHHHHCCCHHHHCCHHHH RRIMEASILAEIDPYRAVTHNKGIMNGVIAVALATGQDHRAIEAGAHAYASRTGVYKPLS HHHHHHHHHHHCCCCHHHHCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC YWEVTSDNYLAGSLEIPLQIGVVGGAVKVHPVAKIALKILGVNTARELAEVMAAVGLAQN CEEECCCCEEEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LAALRALVTEGIQKGHMRLHARNLAIMAGASGDLIDKIAEKMIRDGRIRYDYAKQLVEKA HHHHHHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH LQGEPLD HCCCCCC >Mature Secondary Structure MEKTSRIQGFYKLPLEERRRIVCEWAGLTEEECRTLSEFGNLPVKIGDSMIENVIGAMSY CCCCHHCCCCEECCHHHCCEEEEHCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHCC PFAVATNFLINGRDYLVPMVIEETSVVAAASNAARMLRHGKGILANAERQEMISQIHLVK CHHHHHHHEECCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEE VNSPRFKAMKIIEAKKELLDYAAQQDPTLLKYGGGPRDLEVRAMEHPALGGVIIVHLVVD ECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHH VRDAMGANTVNTMAEAIAPLLEKITGGEARLRIVSNHAVYRVTRAWAATPVEEVGGLEVA HHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEHHHHHCCCHHHHCCHHHH RRIMEASILAEIDPYRAVTHNKGIMNGVIAVALATGQDHRAIEAGAHAYASRTGVYKPLS HHHHHHHHHHHCCCCHHHHCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC YWEVTSDNYLAGSLEIPLQIGVVGGAVKVHPVAKIALKILGVNTARELAEVMAAVGLAQN CEEECCCCEEEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LAALRALVTEGIQKGHMRLHARNLAIMAGASGDLIDKIAEKMIRDGRIRYDYAKQLVEKA HHHHHHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH LQGEPLD HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]