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The map label for this gene is fmdA [H]

Identifier: 218884023

GI number: 218884023

Start: 683022

End: 683957

Strand: Direct

Name: fmdA [H]

Synonym: DKAM_0712

Alternate gene names: 218884023

Gene position: 683022-683957 (Clockwise)

Preceding gene: 218884022

Following gene: 218884025

Centisome position: 50.03

GC content: 50.11

Gene sequence:

>936_bases
ATGGTGGATTACTTGACTAGGCTTGTAGTTATTGATGAATCACATGTATTCTACGAGTTTAATCCAGGGCTGGAACCAGT
TGCACGGGTTAAGCCAGGCGACCTAGTTGTCTTCAAAACCCTCGACGCCCTCGGGGGGCAAGTTAAGAGCGAGGAGGACA
CTATTGAGAAAATAGACTTCACAAGGGTAAACCCTGCAACAGGCCCTCTCTACGTTGAGGATACTGGTCCAGGTGATGTG
CTCGTAGTTGATGTCTTATCTCTCGAGGTATCTGGGAGGGGAGTAATTGTAACAGCGCCCGGTGAAGGGGTTCTCGGTGA
GAGAGTTGACAAGGCAAAGACAAGGGTCTGCATGGTTAACGGTGACTACGTGGAGTTCAAGAGTTTGAAGCTGCCTGCAT
GGAGGATGATCGGTGTTATAGGCGTGGCCAGTGATGAGAAGCCTTCAACAGGGATTCCAGGGAGGCACGGCGGGAACCTT
GATACAAAGTATATTACAGCTGGGTCAAGGGTCTACCTCCCGGTTTTTCACGAAGGAGGCTTGCTGGGCATCGGGGATCT
CCACGCGTCAATGGGACACGGCGAGATCTGTGTTTCAGCATGTGAGGTATCGGGCTCGGTCCTTGTGAGAGTGGGTGTAG
TGAAGAATACTTCCCTTCCATGGCCTATTGTAGACTACGGTGGCTCACTCTACATACTTGTATCCATGGACAGTATCAAT
GATGCATTAAGGGAGGCGGCTAGAGTAGCTGTGGAAACCTTATCAAGGGCTCTAAGAATAGACTGGATTGACGCATACAT
GCTTGCAAGCCTTGGAGTAGACGTTGGTGTGAGTCAACTAGTGGATCCGAGGAAAACAGCTTGGGCCAGGATACCCAAGC
ATATTGTTCAACCCGATATACTGCTCAAGGCTCTCTCAGAGATACGCCCTGAATAA

Upstream 100 bases:

>100_bases
AAAGTAATTAAAAGTACTGTGGGGAGAGTTAGCCCTTAGATTTCATGATCGATGTTCACATGTTAAGTTAAATTTATTCT
CCGGCTTTGATTACTAATTA

Downstream 100 bases:

>100_bases
GCTACTTAGGTGCTGATTCCAGGTCTCTTATTACTGCCTCGGCTACTTTTCTCCCTGAGAGTAGCATGCCTGTGAATATT
GGCCCCATCCTGTTTAAGCC

Product: putative formamidase (formamide amidohydrolase)

Products: NA

Alternate protein names: Formamide amidohydrolase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MVDYLTRLVVIDESHVFYEFNPGLEPVARVKPGDLVVFKTLDALGGQVKSEEDTIEKIDFTRVNPATGPLYVEDTGPGDV
LVVDVLSLEVSGRGVIVTAPGEGVLGERVDKAKTRVCMVNGDYVEFKSLKLPAWRMIGVIGVASDEKPSTGIPGRHGGNL
DTKYITAGSRVYLPVFHEGGLLGIGDLHASMGHGEICVSACEVSGSVLVRVGVVKNTSLPWPIVDYGGSLYILVSMDSIN
DALREAARVAVETLSRALRIDWIDAYMLASLGVDVGVSQLVDPRKTAWARIPKHIVQPDILLKALSEIRPE

Sequences:

>Translated_311_residues
MVDYLTRLVVIDESHVFYEFNPGLEPVARVKPGDLVVFKTLDALGGQVKSEEDTIEKIDFTRVNPATGPLYVEDTGPGDV
LVVDVLSLEVSGRGVIVTAPGEGVLGERVDKAKTRVCMVNGDYVEFKSLKLPAWRMIGVIGVASDEKPSTGIPGRHGGNL
DTKYITAGSRVYLPVFHEGGLLGIGDLHASMGHGEICVSACEVSGSVLVRVGVVKNTSLPWPIVDYGGSLYILVSMDSIN
DALREAARVAVETLSRALRIDWIDAYMLASLGVDVGVSQLVDPRKTAWARIPKHIVQPDILLKALSEIRPE
>Mature_311_residues
MVDYLTRLVVIDESHVFYEFNPGLEPVARVKPGDLVVFKTLDALGGQVKSEEDTIEKIDFTRVNPATGPLYVEDTGPGDV
LVVDVLSLEVSGRGVIVTAPGEGVLGERVDKAKTRVCMVNGDYVEFKSLKLPAWRMIGVIGVASDEKPSTGIPGRHGGNL
DTKYITAGSRVYLPVFHEGGLLGIGDLHASMGHGEICVSACEVSGSVLVRVGVVKNTSLPWPIVDYGGSLYILVSMDSIN
DALREAARVAVETLSRALRIDWIDAYMLASLGVDVGVSQLVDPRKTAWARIPKHIVQPDILLKALSEIRPE

Specific function: Hydrolyzes formamide with the production of ammonia which can be used as a source of nitrogen for growth. Also acts, more slowly, on acetamide, propanamide and butanamide [H]

COG id: COG2421

COG function: function code C; Predicted acetamidase/formamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acetamidase/formamidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004304 [H]

Pfam domain/function: PF03069 FmdA_AmdA [H]

EC number: =3.5.1.49 [H]

Molecular weight: Translated: 33514; Mature: 33514

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDYLTRLVVIDESHVFYEFNPGLEPVARVKPGDLVVFKTLDALGGQVKSEEDTIEKIDF
CCCCEEEEEEEECCEEEEEECCCCCHHHCCCCCCEEEEEEHHHHCCCCCCCCHHHHHCCE
TRVNPATGPLYVEDTGPGDVLVVDVLSLEVSGRGVIVTAPGEGVLGERVDKAKTRVCMVN
EEECCCCCCEEEECCCCCCEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHCCCEEEEEE
GDYVEFKSLKLPAWRMIGVIGVASDEKPSTGIPGRHGGNLDTKYITAGSRVYLPVFHEGG
CCEEEEEEECCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCC
LLGIGDLHASMGHGEICVSACEVSGSVLVRVGVVKNTSLPWPIVDYGGSLYILVSMDSIN
EEEEHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCCEEEEEEECHHH
DALREAARVAVETLSRALRIDWIDAYMLASLGVDVGVSQLVDPRKTAWARIPKHIVQPDI
HHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCHHH
LLKALSEIRPE
HHHHHHHHCCC
>Mature Secondary Structure
MVDYLTRLVVIDESHVFYEFNPGLEPVARVKPGDLVVFKTLDALGGQVKSEEDTIEKIDF
CCCCEEEEEEEECCEEEEEECCCCCHHHCCCCCCEEEEEEHHHHCCCCCCCCHHHHHCCE
TRVNPATGPLYVEDTGPGDVLVVDVLSLEVSGRGVIVTAPGEGVLGERVDKAKTRVCMVN
EEECCCCCCEEEECCCCCCEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHCCCEEEEEE
GDYVEFKSLKLPAWRMIGVIGVASDEKPSTGIPGRHGGNLDTKYITAGSRVYLPVFHEGG
CCEEEEEEECCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCC
LLGIGDLHASMGHGEICVSACEVSGSVLVRVGVVKNTSLPWPIVDYGGSLYILVSMDSIN
EEEEHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCCEEEEEEECHHH
DALREAARVAVETLSRALRIDWIDAYMLASLGVDVGVSQLVDPRKTAWARIPKHIVQPDI
HHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCHHH
LLKALSEIRPE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8841393 [H]