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The map label for this gene is ymfD [H]

Identifier: 218884022

GI number: 218884022

Start: 681461

End: 682912

Strand: Direct

Name: ymfD [H]

Synonym: DKAM_0711

Alternate gene names: 218884022

Gene position: 681461-682912 (Clockwise)

Preceding gene: 218884020

Following gene: 218884023

Centisome position: 49.92

GC content: 47.52

Gene sequence:

>1452_bases
ATGATTATTAGTGATGAAGCGTTAAACTTATATACATTCCTTACAAGTATATACTTAGATTTTATCATGGTGGATAACAT
GAGTCATGGGAAAACCGTGATCTTATTCATGGCATTGTCTCTCACCATGTTATATGCGGATCAAAACCTTATAGCACCAA
TGCTTAAAATCCTCGAGGAAGACGGCATGATACCCGGGATTGGAACCCCCAACTTCTGGTTCTACGCTAGCCTACTGGCA
ACAGTTCCAACATTCGCAGGCATAGCTACAACATTCATCTGGGGATACCTGGCAGATAAACTAAACAGGAAAACGCTCTT
CGCGACAGCTGTACTGCTAGGCGAGATCCCATGTTTCCTCACAGGCTTCGCCAGGAACTACTACGAGATGCTCTTCCTCC
GCGCTTTAACCGGGATAGGTATAAACGGTGCCGCACCAGTAGCTAGGGCGATCATAGCCGACCTCTACCCTCCTGAGAAA
AGGGGGACAGGATATGCCATCTACAACTTCAGCAGTGGTTTCGGCGTGCTCATAGGGATGCTGATGACTGGTATAGTCCT
TTCCGCTGGTTTAACCTGGAGAATCCCGTTCATGCTGGCAGCAGCTCCTAACTTCATCCTTATACCATTATTCTTACTGC
TTGTTAAAGAGGTGAAGATAGGCTACGGGGAGCCTGAGATAAGGAGGTTATACGAGGCTGGATTAGAGTACAGGTTCAGG
ATAAACCTGAGGGAGTTTCTCACTGCTGTAACCGTGACACCCACATTGATCTTTATTTACCTCCAGGGTGTTCCAGGGAC
CTTTCCATGGGGTGCCATACCTTACTGGGCCCCCACTTATTTCCAGGAGAAATGGGGTTTAGATGCGGGAGTAGCGACCC
TGATAATATTCGCTTCAGGTATAGGAATGATGATTGGGTACTTCGTGGGTGGGGTATTATCGGATGCTCTACTCAGGAAG
GGCTTTGAGAGAGCCAGGCTCATAATACCTTTCATAGGCATCATAGCTGGAACCTTCACAGTAATATCGTTGATCAGCTA
CCCCTATCCATACGGTGACTCAAGTTTCACAGCTCTGCTCCCGGTGATCATGCTCGGAGTTTTTGGAATGGTGTTTGTAA
CATTCTCAGCCCCAAACGTCCCGGCCATACTAAGCGAGATCACGCTTCCAGAGCACAGGGGAACAGTCTTCGGGCTCTTC
AATATAACAGACAATATAGGATCAGCAATAGGACCCACACTAGCTGCCGCATTCATGGCGTACTATGAGTCAACGGGTTT
AACTAAGTCTGAAAGCATGTACTACGGGCTGCTACTGGTAAGCCTTCTATGGATACCGTGCGCACTACTATGGCTACCAG
CCTTCAAAACATACAAGCGCGACAAGGAGAAACTAAGGAAAGCACTGGCAGAGAGAGTCGGTAGCCAAGAGTTTTTCCCC
TCACGGAATTAA

Upstream 100 bases:

>100_bases
TCACCAGTCTCGATTTGGCTGCAGTCCTCGCTTGATCCATCAGCATAATGCATGGTTACTCCTTTGATCATCAAGCCAGC
GATACCCCCACAAGTTATAC

Downstream 100 bases:

>100_bases
AATCATCAAAAAGTAATTAAAAGTACTGTGGGGAGAGTTAGCCCTTAGATTTCATGATCGATGTTCACATGTTAAGTTAA
ATTTATTCTCCGGCTTTGAT

Product: Putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MIISDEALNLYTFLTSIYLDFIMVDNMSHGKTVILFMALSLTMLYADQNLIAPMLKILEEDGMIPGIGTPNFWFYASLLA
TVPTFAGIATTFIWGYLADKLNRKTLFATAVLLGEIPCFLTGFARNYYEMLFLRALTGIGINGAAPVARAIIADLYPPEK
RGTGYAIYNFSSGFGVLIGMLMTGIVLSAGLTWRIPFMLAAAPNFILIPLFLLLVKEVKIGYGEPEIRRLYEAGLEYRFR
INLREFLTAVTVTPTLIFIYLQGVPGTFPWGAIPYWAPTYFQEKWGLDAGVATLIIFASGIGMMIGYFVGGVLSDALLRK
GFERARLIIPFIGIIAGTFTVISLISYPYPYGDSSFTALLPVIMLGVFGMVFVTFSAPNVPAILSEITLPEHRGTVFGLF
NITDNIGSAIGPTLAAAFMAYYESTGLTKSESMYYGLLLVSLLWIPCALLWLPAFKTYKRDKEKLRKALAERVGSQEFFP
SRN

Sequences:

>Translated_483_residues
MIISDEALNLYTFLTSIYLDFIMVDNMSHGKTVILFMALSLTMLYADQNLIAPMLKILEEDGMIPGIGTPNFWFYASLLA
TVPTFAGIATTFIWGYLADKLNRKTLFATAVLLGEIPCFLTGFARNYYEMLFLRALTGIGINGAAPVARAIIADLYPPEK
RGTGYAIYNFSSGFGVLIGMLMTGIVLSAGLTWRIPFMLAAAPNFILIPLFLLLVKEVKIGYGEPEIRRLYEAGLEYRFR
INLREFLTAVTVTPTLIFIYLQGVPGTFPWGAIPYWAPTYFQEKWGLDAGVATLIIFASGIGMMIGYFVGGVLSDALLRK
GFERARLIIPFIGIIAGTFTVISLISYPYPYGDSSFTALLPVIMLGVFGMVFVTFSAPNVPAILSEITLPEHRGTVFGLF
NITDNIGSAIGPTLAAAFMAYYESTGLTKSESMYYGLLLVSLLWIPCALLWLPAFKTYKRDKEKLRKALAERVGSQEFFP
SRN
>Mature_483_residues
MIISDEALNLYTFLTSIYLDFIMVDNMSHGKTVILFMALSLTMLYADQNLIAPMLKILEEDGMIPGIGTPNFWFYASLLA
TVPTFAGIATTFIWGYLADKLNRKTLFATAVLLGEIPCFLTGFARNYYEMLFLRALTGIGINGAAPVARAIIADLYPPEK
RGTGYAIYNFSSGFGVLIGMLMTGIVLSAGLTWRIPFMLAAAPNFILIPLFLLLVKEVKIGYGEPEIRRLYEAGLEYRFR
INLREFLTAVTVTPTLIFIYLQGVPGTFPWGAIPYWAPTYFQEKWGLDAGVATLIIFASGIGMMIGYFVGGVLSDALLRK
GFERARLIIPFIGIIAGTFTVISLISYPYPYGDSSFTALLPVIMLGVFGMVFVTFSAPNVPAILSEITLPEHRGTVFGLF
NITDNIGSAIGPTLAAAFMAYYESTGLTKSESMYYGLLLVSLLWIPCALLWLPAFKTYKRDKEKLRKALAERVGSQEFFP
SRN

Specific function: Involved in secretion of bacillibactin [H]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI193209775, Length=413, Percent_Identity=23.0024213075061, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17539092, Length=408, Percent_Identity=23.5294117647059, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 53385; Mature: 53385

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISDEALNLYTFLTSIYLDFIMVDNMSHGKTVILFMALSLTMLYADQNLIAPMLKILEE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DGMIPGIGTPNFWFYASLLATVPTFAGIATTFIWGYLADKLNRKTLFATAVLLGEIPCFL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TGFARNYYEMLFLRALTGIGINGAAPVARAIIADLYPPEKRGTGYAIYNFSSGFGVLIGM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHH
LMTGIVLSAGLTWRIPFMLAAAPNFILIPLFLLLVKEVKIGYGEPEIRRLYEAGLEYRFR
HHHHHHHHCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEE
INLREFLTAVTVTPTLIFIYLQGVPGTFPWGAIPYWAPTYFQEKWGLDAGVATLIIFASG
EEHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
IGMMIGYFVGGVLSDALLRKGFERARLIIPFIGIIAGTFTVISLISYPYPYGDSSFTALL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
PVIMLGVFGMVFVTFSAPNVPAILSEITLPEHRGTVFGLFNITDNIGSAIGPTLAAAFMA
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
YYESTGLTKSESMYYGLLLVSLLWIPCALLWLPAFKTYKRDKEKLRKALAERVGSQEFFP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SRN
CCC
>Mature Secondary Structure
MIISDEALNLYTFLTSIYLDFIMVDNMSHGKTVILFMALSLTMLYADQNLIAPMLKILEE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DGMIPGIGTPNFWFYASLLATVPTFAGIATTFIWGYLADKLNRKTLFATAVLLGEIPCFL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TGFARNYYEMLFLRALTGIGINGAAPVARAIIADLYPPEKRGTGYAIYNFSSGFGVLIGM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHH
LMTGIVLSAGLTWRIPFMLAAAPNFILIPLFLLLVKEVKIGYGEPEIRRLYEAGLEYRFR
HHHHHHHHCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEE
INLREFLTAVTVTPTLIFIYLQGVPGTFPWGAIPYWAPTYFQEKWGLDAGVATLIIFASG
EEHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
IGMMIGYFVGGVLSDALLRKGFERARLIIPFIGIIAGTFTVISLISYPYPYGDSSFTALL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
PVIMLGVFGMVFVTFSAPNVPAILSEITLPEHRGTVFGLFNITDNIGSAIGPTLAAAFMA
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
YYESTGLTKSESMYYGLLLVSLLWIPCALLWLPAFKTYKRDKEKLRKALAERVGSQEFFP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SRN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]