Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884007
Identifier: 218884007
GI number: 218884007
Start: 667215
End: 667589
Strand: Reverse
Name: 218884007
Synonym: DKAM_0696
Alternate gene names: NA
Gene position: 667589-667215 (Counterclockwise)
Preceding gene: 218884008
Following gene: 218884006
Centisome position: 48.9
GC content: 47.47
Gene sequence:
>375_bases GTGTCGTATACGAGGGGGTTGAGCAATATAGTGTCCTCAATACTTCTATTATTAGCCATAGTACCAGCCCTAGTATACCT GGTTAACACCGGCTTAACAAGTGCATCAATAGCCATGGAGACACGGATAGCGGCGAATCATGGATTACTCTACCTGGTTA GAAGCAACGAGGGCTACAGGGTCCTCATATATATTGGGAAACCCCCTGGCAAGCTATACCTGTATGATTCAACCGGTGTC AGGATAGATCTACTGGCTAAATGCGGTTTCACGGAGTCAAGGACATGCATATATCCAGAGCCGCTAGTGCTCAAGCCCCC GGTCTACATGTACATTGATGGAGTAATAATAGCTGGGGTGGTGGTCTCACCATGA
Upstream 100 bases:
>100_bases TTGGAAGAAACATTAGTACACTGATACCTGGACTACTAGTATTCATCTACGGGCTTCTATGACTCCTTATTAGACTCTAG TAGAGTAGCACCTTGAGGAG
Downstream 100 bases:
>100_bases GGCTCCAGGTCGAGGTATACGGTGCTATAGCTTTAACACTATTGTTAACAGCCGGGAGCGGGCTATACATAGGCTTGATT AAGCAGGCCGAAACTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSYTRGLSNIVSSILLLLAIVPALVYLVNTGLTSASIAMETRIAANHGLLYLVRSNEGYRVLIYIGKPPGKLYLYDSTGV RIDLLAKCGFTESRTCIYPEPLVLKPPVYMYIDGVIIAGVVVSP
Sequences:
>Translated_124_residues MSYTRGLSNIVSSILLLLAIVPALVYLVNTGLTSASIAMETRIAANHGLLYLVRSNEGYRVLIYIGKPPGKLYLYDSTGV RIDLLAKCGFTESRTCIYPEPLVLKPPVYMYIDGVIIAGVVVSP >Mature_123_residues SYTRGLSNIVSSILLLLAIVPALVYLVNTGLTSASIAMETRIAANHGLLYLVRSNEGYRVLIYIGKPPGKLYLYDSTGVR IDLLAKCGFTESRTCIYPEPLVLKPPVYMYIDGVIIAGVVVSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13480; Mature: 13349
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTRGLSNIVSSILLLLAIVPALVYLVNTGLTSASIAMETRIAANHGLLYLVRSNEGYR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCEEEEEECCCCCE VLIYIGKPPGKLYLYDSTGVRIDLLAKCGFTESRTCIYPEPLVLKPPVYMYIDGVIIAGV EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCCEEECCCEEEEECCEEEEEE VVSP EECC >Mature Secondary Structure SYTRGLSNIVSSILLLLAIVPALVYLVNTGLTSASIAMETRIAANHGLLYLVRSNEGYR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCEEEEEECCCCCE VLIYIGKPPGKLYLYDSTGVRIDLLAKCGFTESRTCIYPEPLVLKPPVYMYIDGVIIAGV EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCCEEECCCEEEEECCEEEEEE VVSP EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA