Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884008
Identifier: 218884008
GI number: 218884008
Start: 667628
End: 669052
Strand: Reverse
Name: 218884008
Synonym: DKAM_0697
Alternate gene names: NA
Gene position: 669052-667628 (Counterclockwise)
Preceding gene: 218884009
Following gene: 218884007
Centisome position: 49.01
GC content: 45.12
Gene sequence:
>1425_bases GTGAAGAGGATGCTCGGGAGACTCATAGATAAAGTAGTCGATTATTACAGAGGTTGGACGGTGTTTCTTGATGAAGGGTT AGAGGAGTACTTGGAAGCCCCGTGGAAGCTGAAGAGTGCTATAGCGGTAACACTCGAAGGAATCCTAGTGATCCTCTTAA CCTCAGCGTCACAGAGCCCGGGCACTCTAATACTTACAGTGGTACCACTATTGATCATCATTGCCTGGCTTCCAGTACTT GATAAATTAGCGGAGGCCAGGGAGATTCATGGACTCGTGGACAAGGAGCTGGCTTTCTTCATAGTCATGGCTTCGGCTAC TTGTAGAACAGGTCTCGAGCCATTGGAGCTACTTAGATACGTCTCCGAGTCCAGGGTATTCAAGGGGTTCAGGGTAATCG GGGAGAAATTCACTTGTTTGGAAAAGATTATTGGAGTAGGAGATGCGCTCCGAATTGTCTCCTCGGTTTTAAAGGGGATG GCTAGGACATTCTTTATAGAGTACTCCAGTGCGCTGTCTACTGGAACCGTTATAGAGTATTTGATGAGGAGTGCCGGTGA AGCGGTTAAGGATGCCTGGAGTGGGCTCTCGAGGATTGTTGAGAAGAGGAGCGAGCTTGGAGTCTTAATAGCCGTGGTTG CATCGGTTATGCCAGCATTAACCATCGGCTTCACGATTCTAATGGATGTATATATATTATACTACACGTTGATCCCAATC CTAATCCTAGGAGTAGTGGGATCCACTATTATACCTAACTACCCTCTCCCATTCAAAGTACTCATCGAGAAGAGTGTCGG CAAAGTGTTATCACTGATGTATATTGTTGGGGTAGTGCTCTTAACATGCCCATTAACATATATGGTGTTAACGGATAGCA TGATGGAGAAGACGATCCTGTTATACCTAGGTGCTGCATCAATGATTCTTGGAACACCAGGCTTCACACTGATTCTCAGA GCCCTGTTTAAGACGTTTGAATTAAGGAATGTGCTTGAAGACGTCTCAGTAAATGTTAGAACGTATAGGTCACTCATATT TGTCGATGACGAACTCCTCTCACACCTGGGCTCAAAGCCTATACGTACCTGGTTAATAGATTATGTATATGAGACCCTTA GATTCCATAGATCACTCGGTGAGGTAGAGCCAGATGTCTACACCTTGTTCACGGTTTTCACCAATGACTTGCTGAGAACT CTACGCTCATACCTAGCCGGCCTGACAATAATGATTACAGCCATACTATCCACTCCGTTCCTGATTAAGACTCTCCTAAC CATAGCCCCATTTACATCAATCACACTGCAGGTAGCCTATTCAAGCATTCTCGCCACGGGATTCATTTCTTCAAAGCTAA TGCTTGGAAGAAACATTAGTACACTGATACCTGGACTACTAGTATTCATCTACGGGCTTCTATGA
Upstream 100 bases:
>100_bases ATAGCGTGGAATACAGTGATATATGGGTTAGGGAGAGGGATGGCTTAGACATAACGCTAGAAGAGATCCTCAAGCGAAGC CGCAGGATCGGTGGGGCCCT
Downstream 100 bases:
>100_bases CTCCTTATTAGACTCTAGTAGAGTAGCACCTTGAGGAGGTGTCGTATACGAGGGGGTTGAGCAATATAGTGTCCTCAATA CTTCTATTATTAGCCATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKRMLGRLIDKVVDYYRGWTVFLDEGLEEYLEAPWKLKSAIAVTLEGILVILLTSASQSPGTLILTVVPLLIIIAWLPVL DKLAEAREIHGLVDKELAFFIVMASATCRTGLEPLELLRYVSESRVFKGFRVIGEKFTCLEKIIGVGDALRIVSSVLKGM ARTFFIEYSSALSTGTVIEYLMRSAGEAVKDAWSGLSRIVEKRSELGVLIAVVASVMPALTIGFTILMDVYILYYTLIPI LILGVVGSTIIPNYPLPFKVLIEKSVGKVLSLMYIVGVVLLTCPLTYMVLTDSMMEKTILLYLGAASMILGTPGFTLILR ALFKTFELRNVLEDVSVNVRTYRSLIFVDDELLSHLGSKPIRTWLIDYVYETLRFHRSLGEVEPDVYTLFTVFTNDLLRT LRSYLAGLTIMITAILSTPFLIKTLLTIAPFTSITLQVAYSSILATGFISSKLMLGRNISTLIPGLLVFIYGLL
Sequences:
>Translated_474_residues MKRMLGRLIDKVVDYYRGWTVFLDEGLEEYLEAPWKLKSAIAVTLEGILVILLTSASQSPGTLILTVVPLLIIIAWLPVL DKLAEAREIHGLVDKELAFFIVMASATCRTGLEPLELLRYVSESRVFKGFRVIGEKFTCLEKIIGVGDALRIVSSVLKGM ARTFFIEYSSALSTGTVIEYLMRSAGEAVKDAWSGLSRIVEKRSELGVLIAVVASVMPALTIGFTILMDVYILYYTLIPI LILGVVGSTIIPNYPLPFKVLIEKSVGKVLSLMYIVGVVLLTCPLTYMVLTDSMMEKTILLYLGAASMILGTPGFTLILR ALFKTFELRNVLEDVSVNVRTYRSLIFVDDELLSHLGSKPIRTWLIDYVYETLRFHRSLGEVEPDVYTLFTVFTNDLLRT LRSYLAGLTIMITAILSTPFLIKTLLTIAPFTSITLQVAYSSILATGFISSKLMLGRNISTLIPGLLVFIYGLL >Mature_474_residues MKRMLGRLIDKVVDYYRGWTVFLDEGLEEYLEAPWKLKSAIAVTLEGILVILLTSASQSPGTLILTVVPLLIIIAWLPVL DKLAEAREIHGLVDKELAFFIVMASATCRTGLEPLELLRYVSESRVFKGFRVIGEKFTCLEKIIGVGDALRIVSSVLKGM ARTFFIEYSSALSTGTVIEYLMRSAGEAVKDAWSGLSRIVEKRSELGVLIAVVASVMPALTIGFTILMDVYILYYTLIPI LILGVVGSTIIPNYPLPFKVLIEKSVGKVLSLMYIVGVVLLTCPLTYMVLTDSMMEKTILLYLGAASMILGTPGFTLILR ALFKTFELRNVLEDVSVNVRTYRSLIFVDDELLSHLGSKPIRTWLIDYVYETLRFHRSLGEVEPDVYTLFTVFTNDLLRT LRSYLAGLTIMITAILSTPFLIKTLLTIAPFTSITLQVAYSSILATGFISSKLMLGRNISTLIPGLLVFIYGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52663; Mature: 52663
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMLGRLIDKVVDYYRGWTVFLDEGLEEYLEAPWKLKSAIAVTLEGILVILLTSASQSP CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCC GTLILTVVPLLIIIAWLPVLDKLAEAREIHGLVDKELAFFIVMASATCRTGLEPLELLRY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VSESRVFKGFRVIGEKFTCLEKIIGVGDALRIVSSVLKGMARTFFIEYSSALSTGTVIEY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMRSAGEAVKDAWSGLSRIVEKRSELGVLIAVVASVMPALTIGFTILMDVYILYYTLIPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILGVVGSTIIPNYPLPFKVLIEKSVGKVLSLMYIVGVVLLTCPLTYMVLTDSMMEKTIL HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYLGAASMILGTPGFTLILRALFKTFELRNVLEDVSVNVRTYRSLIFVDDELLSHLGSKP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECHHHHHHCCCCH IRTWLIDYVYETLRFHRSLGEVEPDVYTLFTVFTNDLLRTLRSYLAGLTIMITAILSTPF HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH LIKTLLTIAPFTSITLQVAYSSILATGFISSKLMLGRNISTLIPGLLVFIYGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MKRMLGRLIDKVVDYYRGWTVFLDEGLEEYLEAPWKLKSAIAVTLEGILVILLTSASQSP CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCC GTLILTVVPLLIIIAWLPVLDKLAEAREIHGLVDKELAFFIVMASATCRTGLEPLELLRY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VSESRVFKGFRVIGEKFTCLEKIIGVGDALRIVSSVLKGMARTFFIEYSSALSTGTVIEY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMRSAGEAVKDAWSGLSRIVEKRSELGVLIAVVASVMPALTIGFTILMDVYILYYTLIPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILGVVGSTIIPNYPLPFKVLIEKSVGKVLSLMYIVGVVLLTCPLTYMVLTDSMMEKTIL HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYLGAASMILGTPGFTLILRALFKTFELRNVLEDVSVNVRTYRSLIFVDDELLSHLGSKP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECHHHHHHCCCCH IRTWLIDYVYETLRFHRSLGEVEPDVYTLFTVFTNDLLRTLRSYLAGLTIMITAILSTPF HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH LIKTLLTIAPFTSITLQVAYSSILATGFISSKLMLGRNISTLIPGLLVFIYGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA