Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884006
Identifier: 218884006
GI number: 218884006
Start: 666451
End: 667218
Strand: Reverse
Name: 218884006
Synonym: DKAM_0695
Alternate gene names: NA
Gene position: 667218-666451 (Counterclockwise)
Preceding gene: 218884007
Following gene: 218884002
Centisome position: 48.87
GC content: 45.7
Gene sequence:
>768_bases ATGAGGCTCCAGGTCGAGGTATACGGTGCTATAGCTTTAACACTATTGTTAACAGCCGGGAGCGGGCTATACATAGGCTT GATTAAGCAGGCCGAAACTATTCTAACCGAGCTGAACAACTATGCAAGCGATGAGGCGTCAAGGAGTAGTGAGAAATTGT TCTTCAGGCTCCACGGTGACACTGTGATAATAGGTTCCAGCACATATACTATCATTAGGGATATAATAGTCTACAACTCG ACGAGCATAATCTACGAGGATCACTCAGTAGACATAGCAATAGAGCCTGGTTCAAGCATTAATTATACATTACCGGGTAG CGTGGCTGATTCACTAGTGAATGATAGAGCCATCCTAGGCGTGTTTACTGAAAGAGGTAATTTTATAGCATGGAGTCTTG CCGAGGCAGAATACATGTCACAAGTCTTCACGGGCTTCAGGAACACCAGTATCTACGTGGTAAACATTTCCACTTCAAGC CCTCATGAGGCATTGCTAGTCAACTACACGGGAAGTGGTATACTGGTGGAGCTCGTAGTGTACACGTATAGCTCACGTAT AAACATAACGAGAATACTGGTCGACGGGATCCAAGTGAACAATGCCCCGATATTGGTTGGCAGCACAGGCAGTATGGTGC CGGCGCAATTCTCAACCCTACCACTCATGTTCCACACCGTGTTCACCAGGAGTATAGAGATATACGGTATTACGTATATC TCCGGGATGATTGAAGTCATCATTATAGTAGCCTGTTGCGGGTTCTAG
Upstream 100 bases:
>100_bases CGGAGTCAAGGACATGCATATATCCAGAGCCGCTAGTGCTCAAGCCCCCGGTCTACATGTACATTGATGGAGTAATAATA GCTGGGGTGGTGGTCTCACC
Downstream 100 bases:
>100_bases ATCCTTTCTAATTTGGATATTTTTGGATGTGTTTTATCTTCTCGGTGTCTTCACTCGCTTTCCTCGATGACTATTACCTT TTACTTTTCTCCCGGTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MRLQVEVYGAIALTLLLTAGSGLYIGLIKQAETILTELNNYASDEASRSSEKLFFRLHGDTVIIGSSTYTIIRDIIVYNS TSIIYEDHSVDIAIEPGSSINYTLPGSVADSLVNDRAILGVFTERGNFIAWSLAEAEYMSQVFTGFRNTSIYVVNISTSS PHEALLVNYTGSGILVELVVYTYSSRINITRILVDGIQVNNAPILVGSTGSMVPAQFSTLPLMFHTVFTRSIEIYGITYI SGMIEVIIIVACCGF
Sequences:
>Translated_255_residues MRLQVEVYGAIALTLLLTAGSGLYIGLIKQAETILTELNNYASDEASRSSEKLFFRLHGDTVIIGSSTYTIIRDIIVYNS TSIIYEDHSVDIAIEPGSSINYTLPGSVADSLVNDRAILGVFTERGNFIAWSLAEAEYMSQVFTGFRNTSIYVVNISTSS PHEALLVNYTGSGILVELVVYTYSSRINITRILVDGIQVNNAPILVGSTGSMVPAQFSTLPLMFHTVFTRSIEIYGITYI SGMIEVIIIVACCGF >Mature_255_residues MRLQVEVYGAIALTLLLTAGSGLYIGLIKQAETILTELNNYASDEASRSSEKLFFRLHGDTVIIGSSTYTIIRDIIVYNS TSIIYEDHSVDIAIEPGSSINYTLPGSVADSLVNDRAILGVFTERGNFIAWSLAEAEYMSQVFTGFRNTSIYVVNISTSS PHEALLVNYTGSGILVELVVYTYSSRINITRILVDGIQVNNAPILVGSTGSMVPAQFSTLPLMFHTVFTRSIEIYGITYI SGMIEVIIIVACCGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27811; Mature: 27811
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLQVEVYGAIALTLLLTAGSGLYIGLIKQAETILTELNNYASDEASRSSEKLFFRLHGD CEEEEEEHHHHHEEHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC TVIIGSSTYTIIRDIIVYNSTSIIYEDHSVDIAIEPGSSINYTLPGSVADSLVNDRAILG EEEECCCHHHHHEEHHEECCEEEEEECCEEEEEECCCCCEEEEECCHHHHHHHCCCEEEE VFTERGNFIAWSLAEAEYMSQVFTGFRNTSIYVVNISTSSPHEALLVNYTGSGILVELVV EEECCCCEEEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEEEE YTYSSRINITRILVDGIQVNNAPILVGSTGSMVPAQFSTLPLMFHTVFTRSIEIYGITYI EHHCCCCEEEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEEEHHH SGMIEVIIIVACCGF HHHHHHHHHHHHCCC >Mature Secondary Structure MRLQVEVYGAIALTLLLTAGSGLYIGLIKQAETILTELNNYASDEASRSSEKLFFRLHGD CEEEEEEHHHHHEEHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC TVIIGSSTYTIIRDIIVYNSTSIIYEDHSVDIAIEPGSSINYTLPGSVADSLVNDRAILG EEEECCCHHHHHEEHHEECCEEEEEECCEEEEEECCCCCEEEEECCHHHHHHHCCCEEEE VFTERGNFIAWSLAEAEYMSQVFTGFRNTSIYVVNISTSSPHEALLVNYTGSGILVELVV EEECCCCEEEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEEEE YTYSSRINITRILVDGIQVNNAPILVGSTGSMVPAQFSTLPLMFHTVFTRSIEIYGITYI EHHCCCCEEEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEEEHHH SGMIEVIIIVACCGF HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA