| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884005
Identifier: 218884005
GI number: 218884005
Start: 665254
End: 665907
Strand: Direct
Name: 218884005
Synonym: DKAM_0694
Alternate gene names: NA
Gene position: 665254-665907 (Clockwise)
Preceding gene: 218884004
Following gene: 218884012
Centisome position: 48.73
GC content: 39.91
Gene sequence:
>654_bases ATGACAATGCTTCACCAGGTTCAGGAACATATAAAGGAAGATTTGTATGCAACCGGTTTCACTACTCTAAATTACGTACT CGAATACTTTGAATTAGAGTTGGTGGCAAGTATACGTGATAAATCATTAAGTGATGTATTATCGCTTCTCAACGACCTGG GAAACAAGTATAATTCCATACTCGCTTCCAAACTACTTGTAGAGGGGGAAGTCCGGTGTGTAATCGTCTACCGGGAGCCA TATTTAAATATCCAGTGTAGTAAACCGCAGCCTGGACTCGACTCTAAAGTGATCGAGGCCGATATATACATGTTATCCCC GACCCCCTCAATTAAGGATATTTATCCTGCAACAGTGATGAATACACCACTGAAATGCATTAATCAACTATATCTTGCCT CACTATTCTTTAGCAAGGAGCATGCAGTAAAGGGGCTTGAATGCATTGGCCAAGCTGTTAAGGACATAGAGAAGAAGCTA CTTGAAAAACAGGCCTTCGTAAACAAGAAAAACGAGAAAATCTCCAAATTAATACTGGATAAATTATCAAAGACATTGAA AGACCTAGGCATTAAAATAGAAGCTGAGGACTGGGTTAAAGTACTATGGCTAGCGAACGAGTTGGTAATGCTATATAGTG AGACAAAGGCGTAG
Upstream 100 bases:
>100_bases GAATCTAGGACCAACCAGTAAGTAGCCCAGTGGCTTAAAACCCGATGCCTCTAGATGACTAAGTGGAGTCAGTATTATTG ATAAGGCTGGTGTTCACTAT
Downstream 100 bases:
>100_bases TACTCCTAGTTATTCCTCTAGCTATGGCCATGGTTCTACAGCTTATAGCGTCTTTAACTATTATTTCGTTTTCACATTGG TTTATGGTTGTTGATATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTMLHQVQEHIKEDLYATGFTTLNYVLEYFELELVASIRDKSLSDVLSLLNDLGNKYNSILASKLLVEGEVRCVIVYREP YLNIQCSKPQPGLDSKVIEADIYMLSPTPSIKDIYPATVMNTPLKCINQLYLASLFFSKEHAVKGLECIGQAVKDIEKKL LEKQAFVNKKNEKISKLILDKLSKTLKDLGIKIEAEDWVKVLWLANELVMLYSETKA
Sequences:
>Translated_217_residues MTMLHQVQEHIKEDLYATGFTTLNYVLEYFELELVASIRDKSLSDVLSLLNDLGNKYNSILASKLLVEGEVRCVIVYREP YLNIQCSKPQPGLDSKVIEADIYMLSPTPSIKDIYPATVMNTPLKCINQLYLASLFFSKEHAVKGLECIGQAVKDIEKKL LEKQAFVNKKNEKISKLILDKLSKTLKDLGIKIEAEDWVKVLWLANELVMLYSETKA >Mature_216_residues TMLHQVQEHIKEDLYATGFTTLNYVLEYFELELVASIRDKSLSDVLSLLNDLGNKYNSILASKLLVEGEVRCVIVYREPY LNIQCSKPQPGLDSKVIEADIYMLSPTPSIKDIYPATVMNTPLKCINQLYLASLFFSKEHAVKGLECIGQAVKDIEKKLL EKQAFVNKKNEKISKLILDKLSKTLKDLGIKIEAEDWVKVLWLANELVMLYSETKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24690; Mature: 24559
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLHQVQEHIKEDLYATGFTTLNYVLEYFELELVASIRDKSLSDVLSLLNDLGNKYNSI CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LASKLLVEGEVRCVIVYREPYLNIQCSKPQPGLDSKVIEADIYMLSPTPSIKDIYPATVM HHHHHHHCCCEEEEEEEECCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCHHCCCHHHH NTPLKCINQLYLASLFFSKEHAVKGLECIGQAVKDIEKKLLEKQAFVNKKNEKISKLILD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KLSKTLKDLGIKIEAEDWVKVLWLANELVMLYSETKA HHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TMLHQVQEHIKEDLYATGFTTLNYVLEYFELELVASIRDKSLSDVLSLLNDLGNKYNSI CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LASKLLVEGEVRCVIVYREPYLNIQCSKPQPGLDSKVIEADIYMLSPTPSIKDIYPATVM HHHHHHHCCCEEEEEEEECCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCHHCCCHHHH NTPLKCINQLYLASLFFSKEHAVKGLECIGQAVKDIEKKLLEKQAFVNKKNEKISKLILD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KLSKTLKDLGIKIEAEDWVKVLWLANELVMLYSETKA HHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA