Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884012

Identifier: 218884012

GI number: 218884012

Start: 672725

End: 673288

Strand: Direct

Name: 218884012

Synonym: DKAM_0701

Alternate gene names: NA

Gene position: 672725-673288 (Clockwise)

Preceding gene: 218884005

Following gene: 218884013

Centisome position: 49.28

GC content: 45.04

Gene sequence:

>564_bases
ATGGAGTTCGACTCGAGTAGGATACTGGCCGGAATAGGATCAATCCTCATGGCAATAGGCGTCTTTATCCCGTTGCTGAC
GCTAGTGGGATTAATACTGTTACTAATAGGGTTGAGGGGTCTCTCAGATACATACAGGGAGGAGGGTATATTCAGGAATG
CCTTATATGCCGTGATAATCGGTGTAATAGGTTTAGTGACAATAATGTTTGTAGCAATATCTATAGTAGGGATCGCAATA
ACCTTCGCTCCCAGTATACCACTGCACATGGCGAGAGGAGTAATTGGTACAGTACTACTTTTCATCGTGGTATACTTTGT
CATCCTAGTATTAGAGGCATTATTCTACAAGAAGTCCCTTGATCTCCTAGCAACTAAATCAGGTGAGAAGCTCCTGGAGA
CAGCAGGGCTATTATTATTGATCGGGGCGGCTTTGACGATCATAATAGTGGGATTAATACTGGTTTTCATAGCATGGATA
ATAGCCGCAGTAGCCTTCTTCAGCTTGAAGCCACCACAGCCAGCCCAGGAGCAGGTAGTGCAGGCACCTCCGACACTAGC
TTAA

Upstream 100 bases:

>100_bases
GAAGGAATGCTTCCTGGAGTGAAATAATCAGTGCGTCACGGCCCTATATAAGGCTATATTAAGTCTAGAACAGATCTAAT
ATATAAGTGAGGTAAGGGAA

Downstream 100 bases:

>100_bases
AGAGCTTTTTCCCGGGGTTCACAGCTTCATGAGGCCTCGTCTTTCAAGGCGTGGAGCTTGTTTGTAAGCTTTTTGCTAGA
CAGCAATACTTGGAGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVIIGVIGLVTIMFVAISIVGIAI
TFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSLDLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWI
IAAVAFFSLKPPQPAQEQVVQAPPTLA

Sequences:

>Translated_187_residues
MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVIIGVIGLVTIMFVAISIVGIAI
TFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSLDLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWI
IAAVAFFSLKPPQPAQEQVVQAPPTLA
>Mature_187_residues
MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVIIGVIGLVTIMFVAISIVGIAI
TFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSLDLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWI
IAAVAFFSLKPPQPAQEQVVQAPPTLA

Specific function: Unknown

COG id: COG2245

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19928; Mature: 19928

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GVIGLVTIMFVAISIVGIAITFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWIIAAVAFFSLKPPQPAQEQVV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QAPPTLA
CCCCCCC
>Mature Secondary Structure
MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GVIGLVTIMFVAISIVGIAITFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWIIAAVAFFSLKPPQPAQEQVV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QAPPTLA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA