| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884003
Identifier: 218884003
GI number: 218884003
Start: 663592
End: 664323
Strand: Direct
Name: 218884003
Synonym: DKAM_0692
Alternate gene names: NA
Gene position: 663592-664323 (Clockwise)
Preceding gene: 218884001
Following gene: 218884004
Centisome position: 48.61
GC content: 46.31
Gene sequence:
>732_bases ATGTATGGTATTGGGGTAAGTGGTAGGATCAATATTGGGGATAACATTATAGAATATGATGGAGCTAGGAGCAGGTATCG TAGGATGAGCAGGGACGGTTCCATAACTGTATCGTTGGACTTGCAGGGAGAGCATAGTATCGTCGCGGAACCTATTCACT CCCTCTACATACCGGGCTTCAACACAAAGTATATGCTCGTGGAGCTGGTTGATAGAATAGTTGTCCCTCCCAATTCCTCG GTAGGCTTCTTCATCAAGATCCCGGTGGATCTAGGCGTATTCATGGTTGGAAGAGACTTCTATAAGCTGATAGATGTTGC CCCGTTGCTCAATTATTATAAGTACACACTATATGGTCCCCTTGCATCGCTCGAGGAGGTAAGCGGGATCTTATGCAGGC ACTGGAGAAGCATGAGTTACAATGGGAAAACAAGCGTTGAACCCGGGGAATGCCTAGTTGAGGCTGAGGTAGTAAACGAA TTAGGGGATTCAATCACAGTCTCCAAGATACTTGTGGATGCATCCTATATGCCCCTCTACTATGAAATAAATACCTTCAA CTGCTACGCTGGTAAGATAAGGATGGTTGTAAAGAGCAGGGGTATCGGGGAAATAATGTATCCCAGGATCCAGCCGCCCC AGGGTTACTTGAAGGCTGATGTTCCAGCTGAACTAAGGCCCCCGCCTATCCCTATAATAGCTTGGAAAACAGAGATGATA TGGGGTTTATGA
Upstream 100 bases:
>100_bases ACCAAATGTGAAAACTAAAAAGCAATCGAAGACTTAATATTTAGCTTTCTAGATTTTAGTGTCAGTGCACGGGATTCGCC GAGACTACGGGGCTCTCGGA
Downstream 100 bases:
>100_bases GATGATTAATTTCTCATGGATACTGGAAACAGTAATCAATGCCTTCACATCTCTAGGATTGAGTAGAGACCTGGCCTTAA GGGTGTTCATCGCACTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MYGIGVSGRINIGDNIIEYDGARSRYRRMSRDGSITVSLDLQGEHSIVAEPIHSLYIPGFNTKYMLVELVDRIVVPPNSS VGFFIKIPVDLGVFMVGRDFYKLIDVAPLLNYYKYTLYGPLASLEEVSGILCRHWRSMSYNGKTSVEPGECLVEAEVVNE LGDSITVSKILVDASYMPLYYEINTFNCYAGKIRMVVKSRGIGEIMYPRIQPPQGYLKADVPAELRPPPIPIIAWKTEMI WGL
Sequences:
>Translated_243_residues MYGIGVSGRINIGDNIIEYDGARSRYRRMSRDGSITVSLDLQGEHSIVAEPIHSLYIPGFNTKYMLVELVDRIVVPPNSS VGFFIKIPVDLGVFMVGRDFYKLIDVAPLLNYYKYTLYGPLASLEEVSGILCRHWRSMSYNGKTSVEPGECLVEAEVVNE LGDSITVSKILVDASYMPLYYEINTFNCYAGKIRMVVKSRGIGEIMYPRIQPPQGYLKADVPAELRPPPIPIIAWKTEMI WGL >Mature_243_residues MYGIGVSGRINIGDNIIEYDGARSRYRRMSRDGSITVSLDLQGEHSIVAEPIHSLYIPGFNTKYMLVELVDRIVVPPNSS VGFFIKIPVDLGVFMVGRDFYKLIDVAPLLNYYKYTLYGPLASLEEVSGILCRHWRSMSYNGKTSVEPGECLVEAEVVNE LGDSITVSKILVDASYMPLYYEINTFNCYAGKIRMVVKSRGIGEIMYPRIQPPQGYLKADVPAELRPPPIPIIAWKTEMI WGL
Specific function: Unknown
COG id: COG2430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27326; Mature: 27326
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGIGVSGRINIGDNIIEYDGARSRYRRMSRDGSITVSLDLQGEHSIVAEPIHSLYIPGF CCCCCCCEEEECCCCEEECCCHHHHHHHHCCCCCEEEEEEECCCCCHHHCCHHHEECCCC NTKYMLVELVDRIVVPPNSSVGFFIKIPVDLGVFMVGRDFYKLIDVAPLLNYYKYTLYGP CCHHHHHHHHHHEECCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHEEEECC LASLEEVSGILCRHWRSMSYNGKTSVEPGECLVEAEVVNELGDSITVSKILVDASYMPLY HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHCCCCEEEEHEEEECCCCEEE YEINTFNCYAGKIRMVVKSRGIGEIMYPRIQPPQGYLKADVPAELRPPPIPIIAWKTEMI EEECCEEEECCEEEEEEECCCCCCEECCCCCCCCCCEEECCCCCCCCCCCEEEEEEHHEE WGL CCC >Mature Secondary Structure MYGIGVSGRINIGDNIIEYDGARSRYRRMSRDGSITVSLDLQGEHSIVAEPIHSLYIPGF CCCCCCCEEEECCCCEEECCCHHHHHHHHCCCCCEEEEEEECCCCCHHHCCHHHEECCCC NTKYMLVELVDRIVVPPNSSVGFFIKIPVDLGVFMVGRDFYKLIDVAPLLNYYKYTLYGP CCHHHHHHHHHHEECCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHEEEECC LASLEEVSGILCRHWRSMSYNGKTSVEPGECLVEAEVVNELGDSITVSKILVDASYMPLY HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHCCCCEEEEHEEEECCCCEEE YEINTFNCYAGKIRMVVKSRGIGEIMYPRIQPPQGYLKADVPAELRPPPIPIIAWKTEMI EEECCEEEECCEEEEEEECCCCCCEECCCCCCCCCCEEECCCCCCCCCCCEEEEEEHHEE WGL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA