Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883966
Identifier: 218883966
GI number: 218883966
Start: 630029
End: 630766
Strand: Reverse
Name: 218883966
Synonym: DKAM_0655
Alternate gene names: NA
Gene position: 630766-630029 (Counterclockwise)
Preceding gene: 218883968
Following gene: 218883965
Centisome position: 46.2
GC content: 44.85
Gene sequence:
>738_bases ATGGGAGGCTTATTCGATCCAGATACAGAGTCAGAGTTAAGGAAGATATTCCAGGCTTTTCCCAGAGAACTAAATGATAT ATTAGTGGTTTCAAGCAGTGGTGGAGGGCATGAACACCATGAAGACGAGGAAGAACATCATCACCACCATGGAGATTGTC CCACATGCGATGAGGCAAAAGTACTTGCAGAGGAAATCATGAGGATTAGCGGGGGGAAGATCAGATTCACGATATTAAAC CCTGAGAATTTTTCGGGGCTGAGGCCAAGATATATCCCGGCATTCATTTATGATACCCCTAAGAGGAATATACGCTACTA TGGCCTACCAAGCGGACAGGAGTTCGCGCCATTCATATTCATACACGACTATATATCTAACGGCGTTAAGCTATCAAAGA GCGTTATAGAAGAAATAGAGAGTATTGATACTCCTCTCCATGTAAAGATATTCGTGACGCCAGAATGCCCGTACTGCCCA CTAGTTGTAGACTTCTTCAATCAAGCCGGCATAGTTAACCAGAATATAGTTGTTGAGACAATAGAGGCGTTAGAACACCC TATTGAGGCAGACTCTTACGGGGTGCAGTATGTGCCATTCGTGACGATCACTAAATTAAGCGATTACGAGAAATACGGTG CGAAGCCGGTTGAGGTGATCCCCGGATACCTGCCACCAGAGGAAAACGCGAAGATCCTGGTTAAAGCCGGGAATAAACTA AGGAGGATTAATTCCTGA
Upstream 100 bases:
>100_bases ATTTTATAACTAGCCTATAGAGATCCTTATTAAGTTAATCCATATATTTTAAAAGGTGTTAAATAAAATAAATGTTAGAT GGGCCTAACAGGTGATTACG
Downstream 100 bases:
>100_bases GGATTAAAACCATGATCGGTGAGCGCTCAGAAGAATACCTGGAAGTAATATATGTGTTATCTATGAATGGAAGGCCAAAG GTCAGGGAGATAGCTAGGAG
Product: glutaredoxin-like protein
Products: NA
Alternate protein names: Glutaredoxin-Like Domain-Containing Protein; Glutaredoxin-Like Protein; Glutaredoxin-Related Protein; Protein Disulfide Oxidoreductase; NADH Dehydrogenase; Alkyl Hydroperoxide Reductase Subunit F Related Protein; Dehydrogenase Selenocysteine-Containing; Dehydrogenase Selenocysteine-Containing Protein; Glutaredoxin Related Protein; Alkyl Hydroperoxide Reductase Large Subunit
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MGGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAKVLAEEIMRISGGKIRFTILN PENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIFIHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCP LVVDFFNQAGIVNQNIVVETIEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKL RRINS
Sequences:
>Translated_245_residues MGGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAKVLAEEIMRISGGKIRFTILN PENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIFIHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCP LVVDFFNQAGIVNQNIVVETIEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKL RRINS >Mature_244_residues GGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAKVLAEEIMRISGGKIRFTILNP ENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIFIHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCPL VVDFFNQAGIVNQNIVVETIEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKLR RINS
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27680; Mature: 27548
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAK CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHH VLAEEIMRISGGKIRFTILNPENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIF HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEE IHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCPLVVDFFNQAGIVNQNIVVET EEHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHH IEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKL HHHHHCCCCCCCCCEEEECEEEEEECCCHHHHCCCCCEECCCCCCCCCCCEEEEECCCCH RRINS HCCCC >Mature Secondary Structure GGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAK CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHH VLAEEIMRISGGKIRFTILNPENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIF HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEE IHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCPLVVDFFNQAGIVNQNIVVET EEHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHH IEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKL HHHHHCCCCCCCCCEEEECEEEEEECCCHHHHCCCCCEECCCCCCCCCCCEEEEECCCCH RRINS HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA