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The map label for this gene is pgtC [H]

Identifier: 218883950

GI number: 218883950

Start: 614849

End: 616495

Strand: Direct

Name: pgtC [H]

Synonym: DKAM_0639

Alternate gene names: 218883950

Gene position: 614849-616495 (Clockwise)

Preceding gene: 218883949

Following gene: 218883951

Centisome position: 45.04

GC content: 42.68

Gene sequence:

>1647_bases
GTGTATATATTCTATTTTAACAGGGGGAGTATATCCATGACTCATGCTCTCACTAAGCTTCAAGCACTATTTATTTCAGT
AGTTATCATAATAGCAGTAATAGGGGTATTCCTTGGTACACGAACTCTGATTCCACCAGCTATAACTACCACAACTACAA
CAACTACGACCACTACCACAACACCTCCTACGACTACGACAACCACCACAACGACTACGACAAGTAAGCCTTCATATCCT
GAGTATCCATGGCTGGATCAATTAAAGCAGATGACCACCGAGAGGAATGTAGAGCTAATAGTGATAACAAGGCATGAACA
ATCCATCCTAAGTGAGACTACAAAGGAGTTCCTGAATTCTCCAGTAGCAAAGGAGCTGGGTATAGTCAATATACGGTTTT
TATTTGTGTCAGCTGAATTATGGTCCAGCTCTATTAATAACGCTGTCAAGGCAGGTAGGCCAATAGACATAGCATGGGGT
GGCGGTCCTACACTATTTAACACTATGGATTCCCTGGGATATCTCCTACCTATTAACCTAAGTAAGCCTGAGTTTCAGGC
AATAAAATATGAGATGGATAAGATACCGAGGATTATAGGTGGGGCCGAGGCATACAAGGTTGACCAGAATGGATTAGTAC
GATGGATCGGGGCTAGTGTAAGTAGCTTCGGCTTCACAGTGAACCTCATACGCTTAAACCAGTATGGATTACCAATACCA
CAGAAATGGGAGGATCTAGCGAGCCCTGTTTACGCAAAGTACCTGCCCGATATACCACAGATATCTACAGCTGATCCAAC
CATGAGTACAAGTAACACTAGGATCTTTGAGATAATTTTACAGGCTAAAGGATGGGATGAGGGATGGAGGATTCTTACAC
TACTAGCTGCAAATGCCATGATATATTCTCAAAGCAGCGAGGTCCGCGACGCAGTGATACATGGTGATGTAGCTATAGGT
ACGACAATAGACTTCTACGGTTACATGGCTCAGCGACTTGATCCTAATTGCAAGTATATAGCACCTCAGGGAGAAACTAT
AATTAATAGTGATCCAATAGCAATCCTAAACACCACGAAGCACCTGATCCATGCTGTAGCGTTTGTTGCATGGGTACTTA
ACGAGTATGGCGGGCAACAGGTCTGGCTCAATCCTGATATCAATAGGCTGCCAGTGAATCCATACGTCTTCAATACAACA
CAGGGTCAAAACAGGCAAGACTTAAAGCAAGCCTTCCAGGATGCATTGAATGCGCAGAGTATATTATTCAACGAGACTCT
TTCAACAAACTGGGTATACTCAATTATGTACTACTTCAAGGCTACATTAGTGAATCCACATGCAGATCTACAAGCTACAT
GGGCAAGAATAGCCCAAGCCTATTTGAATGGTAAAATAAGTAAGGAATGGTTCGACTACTTATCCATGTATATATCAAAA
CCACTCACATTCACGGATCCTGTAACGGGTAAGCAAACCAATTTCACATTGGATTACGCAGTGTTCATTAATCAGAGACT
TCAAAAGGATGCAGCGGTGTACCAGTCGTTAATGAGTCAATGGGAGCAGCTGGCTAGGCAGAGGTATCTTAATGCATTAA
ACCTGTTAAATGACGCATTAGCTGGAAAGCCAATCCCTTCTAGCTGA

Upstream 100 bases:

>100_bases
ATACATTCTCGGCGGAGGCTTTTTCTAGGCGTCTTGAAAGCCCTGGCCGGCTTATTCCACTTTTTAGAACTGTTCATATA
AAAATTTATATTATAATGTA

Downstream 100 bases:

>100_bases
ATAATTTATTTCAGAACCGTATTTTTAAACCCCTTCTCCATCATGTATAAAACAAAACATGGCGGGGATCACCATTGAGT
AGGCCCAACACACTATTATT

Product: extracellular solute-binding protein, family 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MYIFYFNRGSISMTHALTKLQALFISVVIIIAVIGVFLGTRTLIPPAITTTTTTTTTTTTTPPTTTTTTTTTTTSKPSYP
EYPWLDQLKQMTTERNVELIVITRHEQSILSETTKEFLNSPVAKELGIVNIRFLFVSAELWSSSINNAVKAGRPIDIAWG
GGPTLFNTMDSLGYLLPINLSKPEFQAIKYEMDKIPRIIGGAEAYKVDQNGLVRWIGASVSSFGFTVNLIRLNQYGLPIP
QKWEDLASPVYAKYLPDIPQISTADPTMSTSNTRIFEIILQAKGWDEGWRILTLLAANAMIYSQSSEVRDAVIHGDVAIG
TTIDFYGYMAQRLDPNCKYIAPQGETIINSDPIAILNTTKHLIHAVAFVAWVLNEYGGQQVWLNPDINRLPVNPYVFNTT
QGQNRQDLKQAFQDALNAQSILFNETLSTNWVYSIMYYFKATLVNPHADLQATWARIAQAYLNGKISKEWFDYLSMYISK
PLTFTDPVTGKQTNFTLDYAVFINQRLQKDAAVYQSLMSQWEQLARQRYLNALNLLNDALAGKPIPSS

Sequences:

>Translated_548_residues
MYIFYFNRGSISMTHALTKLQALFISVVIIIAVIGVFLGTRTLIPPAITTTTTTTTTTTTTPPTTTTTTTTTTTSKPSYP
EYPWLDQLKQMTTERNVELIVITRHEQSILSETTKEFLNSPVAKELGIVNIRFLFVSAELWSSSINNAVKAGRPIDIAWG
GGPTLFNTMDSLGYLLPINLSKPEFQAIKYEMDKIPRIIGGAEAYKVDQNGLVRWIGASVSSFGFTVNLIRLNQYGLPIP
QKWEDLASPVYAKYLPDIPQISTADPTMSTSNTRIFEIILQAKGWDEGWRILTLLAANAMIYSQSSEVRDAVIHGDVAIG
TTIDFYGYMAQRLDPNCKYIAPQGETIINSDPIAILNTTKHLIHAVAFVAWVLNEYGGQQVWLNPDINRLPVNPYVFNTT
QGQNRQDLKQAFQDALNAQSILFNETLSTNWVYSIMYYFKATLVNPHADLQATWARIAQAYLNGKISKEWFDYLSMYISK
PLTFTDPVTGKQTNFTLDYAVFINQRLQKDAAVYQSLMSQWEQLARQRYLNALNLLNDALAGKPIPSS
>Mature_548_residues
MYIFYFNRGSISMTHALTKLQALFISVVIIIAVIGVFLGTRTLIPPAITTTTTTTTTTTTTPPTTTTTTTTTTTSKPSYP
EYPWLDQLKQMTTERNVELIVITRHEQSILSETTKEFLNSPVAKELGIVNIRFLFVSAELWSSSINNAVKAGRPIDIAWG
GGPTLFNTMDSLGYLLPINLSKPEFQAIKYEMDKIPRIIGGAEAYKVDQNGLVRWIGASVSSFGFTVNLIRLNQYGLPIP
QKWEDLASPVYAKYLPDIPQISTADPTMSTSNTRIFEIILQAKGWDEGWRILTLLAANAMIYSQSSEVRDAVIHGDVAIG
TTIDFYGYMAQRLDPNCKYIAPQGETIINSDPIAILNTTKHLIHAVAFVAWVLNEYGGQQVWLNPDINRLPVNPYVFNTT
QGQNRQDLKQAFQDALNAQSILFNETLSTNWVYSIMYYFKATLVNPHADLQATWARIAQAYLNGKISKEWFDYLSMYISK
PLTFTDPVTGKQTNFTLDYAVFINQRLQKDAAVYQSLMSQWEQLARQRYLNALNLLNDALAGKPIPSS

Specific function: Required for pgtP expression, it may act jointly with the pgtA/pgtB signaling proteins [H]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 61462; Mature: 61462

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIFYFNRGSISMTHALTKLQALFISVVIIIAVIGVFLGTRTLIPPAITTTTTTTTTTTT
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEC
TPPTTTTTTTTTTTSKPSYPEYPWLDQLKQMTTERNVELIVITRHEQSILSETTKEFLNS
CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
PVAKELGIVNIRFLFVSAELWSSSINNAVKAGRPIDIAWGGGPTLFNTMDSLGYLLPINL
CHHHHCCEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCEEEEECC
SKPEFQAIKYEMDKIPRIIGGAEAYKVDQNGLVRWIGASVSSFGFTVNLIRLNQYGLPIP
CCCHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEEECCCHHCCCEEEEEEEEECCCCCCC
QKWEDLASPVYAKYLPDIPQISTADPTMSTSNTRIFEIILQAKGWDEGWRILTLLAANAM
HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
IYSQSSEVRDAVIHGDVAIGTTIDFYGYMAQRLDPNCKYIAPQGETIINSDPIAILNTTK
EECCCHHHHHHHEECCEEECCCHHHHHHHHHHCCCCCCEECCCCCEEECCCCEEEEHHHH
HLIHAVAFVAWVLNEYGGQQVWLNPDINRLPVNPYVFNTTQGQNRQDLKQAFQDALNAQS
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCHHH
ILFNETLSTNWVYSIMYYFKATLVNPHADLQATWARIAQAYLNGKISKEWFDYLSMYISK
EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PLTFTDPVTGKQTNFTLDYAVFINQRLQKDAAVYQSLMSQWEQLARQRYLNALNLLNDAL
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGKPIPSS
CCCCCCCC
>Mature Secondary Structure
MYIFYFNRGSISMTHALTKLQALFISVVIIIAVIGVFLGTRTLIPPAITTTTTTTTTTTT
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEC
TPPTTTTTTTTTTTSKPSYPEYPWLDQLKQMTTERNVELIVITRHEQSILSETTKEFLNS
CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
PVAKELGIVNIRFLFVSAELWSSSINNAVKAGRPIDIAWGGGPTLFNTMDSLGYLLPINL
CHHHHCCEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCEEEEECC
SKPEFQAIKYEMDKIPRIIGGAEAYKVDQNGLVRWIGASVSSFGFTVNLIRLNQYGLPIP
CCCHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEEECCCHHCCCEEEEEEEEECCCCCCC
QKWEDLASPVYAKYLPDIPQISTADPTMSTSNTRIFEIILQAKGWDEGWRILTLLAANAM
HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
IYSQSSEVRDAVIHGDVAIGTTIDFYGYMAQRLDPNCKYIAPQGETIINSDPIAILNTTK
EECCCHHHHHHHEECCEEECCCHHHHHHHHHHCCCCCCEECCCCCEEECCCCEEEEHHHH
HLIHAVAFVAWVLNEYGGQQVWLNPDINRLPVNPYVFNTTQGQNRQDLKQAFQDALNAQS
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCHHH
ILFNETLSTNWVYSIMYYFKATLVNPHADLQATWARIAQAYLNGKISKEWFDYLSMYISK
EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PLTFTDPVTGKQTNFTLDYAVFINQRLQKDAAVYQSLMSQWEQLARQRYLNALNLLNDAL
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGKPIPSS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]