| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883879
Identifier: 218883879
GI number: 218883879
Start: 532604
End: 533023
Strand: Reverse
Name: 218883879
Synonym: DKAM_0568
Alternate gene names: NA
Gene position: 533023-532604 (Counterclockwise)
Preceding gene: 218883880
Following gene: 218883878
Centisome position: 39.04
GC content: 43.33
Gene sequence:
>420_bases GTGAGGCTTAGAGGACTCATTCCACTATTTCTCCTGGCACTAATGCTCTCAACGATCTATAGTGTAGCCGAGGAGAATGC TAATATAACCGGGGTCGATATACTTAATGAGCTGCTGAGTAATCCAAGAGTATATATAGCAGTATTCATACAATTCATAC TGGGACTAGCCATCGGGTATTTCTCATTAAAGGTCCTCAAGTACATTGTAGCATTAATACTCATCATAATACTTGGAGTA ATACTCTCCGTATGGAGCATAGGCGGGAGCATATATGACTTACTCGCCAAAATATATGGCTCATCCTCGCAGATACTTAA AATAGTTGAATCAATCGCCTCAACCCTCGGGTTGCTGACAATCGGACCCATCGCAGTGGGCTTTATAGTGGGAGTGATAA TCGCCTGGGTCAAGGGCTAG
Upstream 100 bases:
>100_bases TTTAACGAATGGATGCCTGTGCCGCCGCCCAGCACGGATAAGTTGTCGCCACAAACCTTTATATAGGAGTTAAATAATAG CGTATCAATGGTGACTCTTA
Downstream 100 bases:
>100_bases GCAAACCCATGAAGCAAAGCCCGCCTTGTAAACCCCTTGTAGGGCTGGTCAAGGGCGGGTTCCGCGGCGTGCCGGAGAGG GCTGGCGTCTACGTGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGYFSLKVLKYIVALILIIILGV ILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLTIGPIAVGFIVGVIIAWVKG
Sequences:
>Translated_139_residues MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGYFSLKVLKYIVALILIIILGV ILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLTIGPIAVGFIVGVIIAWVKG >Mature_139_residues MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGYFSLKVLKYIVALILIIILGV ILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLTIGPIAVGFIVGVIIAWVKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14964; Mature: 14964
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FSLKVLKYIVALILIIILGVILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLT HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH IGPIAVGFIVGVIIAWVKG HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FSLKVLKYIVALILIIILGVILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLT HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH IGPIAVGFIVGVIIAWVKG HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA