| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883878
Identifier: 218883878
GI number: 218883878
Start: 532149
End: 532595
Strand: Reverse
Name: 218883878
Synonym: DKAM_0567
Alternate gene names: NA
Gene position: 532595-532149 (Counterclockwise)
Preceding gene: 218883879
Following gene: 218883875
Centisome position: 39.01
GC content: 51.68
Gene sequence:
>447_bases ATGAAGCAAAGCCCGCCTTGTAAACCCCTTGTAGGGCTGGTCAAGGGCGGGTTCCGCGGCGTGCCGGAGAGGGCTGGCGT CTACGTGGTCTTCTGGGCTAAGAATGGAAAGCCTGTGGCCATACCCAGGATCAGGTGTCTTGATGAGAAGGGCGTGCTCT ATATAGGCTCGGCTAAAAACCTTAGGCAAAGGGTTAGAAACCTGTGGACTAGTATTAAAGTAGCCCGCAGGTTTGGGGCC CGGAAAAAGTACCCCCACACCTTCGTGGTCTCACTAGTCTACACAGGATTGCTTGATACAATAGCGGATCAAGAGCTCTG CTTTTACTTCAAAGCGTTTGATGAGCAGAACGCCAGACACCAGGAGAAAGCGGCACTCTTTGAATATACTAGGAGGTATG GAGAACCCTCAACCTCAGCATTGGGAGAGCGTATTTCATGGTACTAG
Upstream 100 bases:
>100_bases AATCAATCGCCTCAACCCTCGGGTTGCTGACAATCGGACCCATCGCAGTGGGCTTTATAGTGGGAGTGATAATCGCCTGG GTCAAGGGCTAGGCAAACCC
Downstream 100 bases:
>100_bases GTCTAGGAGTTCTAGGTAAGTCGAGGCTTGCGTCAAAGCTGGACCTCGAGCTCCGCGAAGCCCTAGGGCTCTGAGACCAG GTGCCCGCGCCTATAGCGCC
Product: GIYc domain containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKQSPPCKPLVGLVKGGFRGVPERAGVYVVFWAKNGKPVAIPRIRCLDEKGVLYIGSAKNLRQRVRNLWTSIKVARRFGA RKKYPHTFVVSLVYTGLLDTIADQELCFYFKAFDEQNARHQEKAALFEYTRRYGEPSTSALGERISWY
Sequences:
>Translated_148_residues MKQSPPCKPLVGLVKGGFRGVPERAGVYVVFWAKNGKPVAIPRIRCLDEKGVLYIGSAKNLRQRVRNLWTSIKVARRFGA RKKYPHTFVVSLVYTGLLDTIADQELCFYFKAFDEQNARHQEKAALFEYTRRYGEPSTSALGERISWY >Mature_148_residues MKQSPPCKPLVGLVKGGFRGVPERAGVYVVFWAKNGKPVAIPRIRCLDEKGVLYIGSAKNLRQRVRNLWTSIKVARRFGA RKKYPHTFVVSLVYTGLLDTIADQELCFYFKAFDEQNARHQEKAALFEYTRRYGEPSTSALGERISWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16946; Mature: 16946
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS50164 UVRC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSPPCKPLVGLVKGGFRGVPERAGVYVVFWAKNGKPVAIPRIRCLDEKGVLYIGSAKN CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCEEEECCCCEEEEECHHH LRQRVRNLWTSIKVARRFGARKKYPHTFVVSLVYTGLLDTIADQELCFYFKAFDEQNARH HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH QEKAALFEYTRRYGEPSTSALGERISWY HHHHHHHHHHHHHCCCCHHHHHHHCCCC >Mature Secondary Structure MKQSPPCKPLVGLVKGGFRGVPERAGVYVVFWAKNGKPVAIPRIRCLDEKGVLYIGSAKN CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCEEEECCCCEEEEECHHH LRQRVRNLWTSIKVARRFGARKKYPHTFVVSLVYTGLLDTIADQELCFYFKAFDEQNARH HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH QEKAALFEYTRRYGEPSTSALGERISWY HHHHHHHHHHHHHCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA