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The map label for this gene is korB [H]

Identifier: 218883845

GI number: 218883845

Start: 501957

End: 502787

Strand: Reverse

Name: korB [H]

Synonym: DKAM_0534

Alternate gene names: 218883845

Gene position: 502787-501957 (Counterclockwise)

Preceding gene: 218883846

Following gene: 218883844

Centisome position: 36.83

GC content: 47.77

Gene sequence:

>831_bases
ATGGCTGTAACCCCTAGATACATACACCAGCTTGACAAACACCTTAGACTCGACAGGATACCCACATTATACTGTCCCGG
ATGCGGCCTTGGAATAGGATTAGGAGCCATGCTCAGGGCGCTTGATAAAAGAATCAGTGAGGGGGTAGTGGATAGGAATA
AAGTGGTATGGGTTGGAGGTATAGGGTGTAGTGCTAGAATGGCCTTTTACGTTAGCTATGATTCAGCACACGTCCTCCAC
GGTAGGGCGATACCGTTCGCGACAGGCGTTAAACTCGCAAACCCGGAACTAACATTAATAGTTGTAGGGGGCGATGGAGA
TATCGCCGGCATTGGGGGCAACCACCTACTCCATGCCGCTAAGAGGAATATAGATATGATCACAGTCATGTTCACGAACT
TCGTTTACGCGATGACGGGCGGCCAAGTAGCACCTACGACGCCCCTTGGGGTTAAAACTACGACGACTCCTCATGGTAAT
CCAGAGCCTCCATTGAATATCATAAAAGTCGTGGCATCGCTGAACGCGAACTATGTGGCTAGGGCTAGTGTAACGACACC
GCATTACATAGAGCAGTTCTTCTACAGGGCTTTAGGTATGAAGGGGTTTAGATTCATAGAAGTGGTGAGCACGTGCCCCG
AAGTATATGGAAGGCGCATCGGGCTCGGAGACCCTGTTGAAATGTATAATGAGTTGAAGAAAAGAGTTAAGTACAAGCCT
AATCCAACAATAGATGAAGCCTTAATAGACTGGGAGAAAGGCATAATTATAGGTGAATTCACGGTTCGAGACAACCCATC
ATACCTGGAGATCATAAGGGGGTTGAAATGA

Upstream 100 bases:

>100_bases
TCGATATGAAACGCATTTTTAGAGATAGAGAGGTGTATTCAGCCCCCGTTGTAAGCCTTGAACTACCCACTGTGAAAGAA
GTAATTGAGGCGGTGGAGCA

Downstream 100 bases:

>100_bases
AGGTAGAGGTACTTATAATTGGACGTGGAGGACAGGGTGTATTACTACTGGGTAGAATACTTGGGTTATCGATCAGCAAG
TATGCTGGGAAATATGCTGT

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MAVTPRYIHQLDKHLRLDRIPTLYCPGCGLGIGLGAMLRALDKRISEGVVDRNKVVWVGGIGCSARMAFYVSYDSAHVLH
GRAIPFATGVKLANPELTLIVVGGDGDIAGIGGNHLLHAAKRNIDMITVMFTNFVYAMTGGQVAPTTPLGVKTTTTPHGN
PEPPLNIIKVVASLNANYVARASVTTPHYIEQFFYRALGMKGFRFIEVVSTCPEVYGRRIGLGDPVEMYNELKKRVKYKP
NPTIDEALIDWEKGIIIGEFTVRDNPSYLEIIRGLK

Sequences:

>Translated_276_residues
MAVTPRYIHQLDKHLRLDRIPTLYCPGCGLGIGLGAMLRALDKRISEGVVDRNKVVWVGGIGCSARMAFYVSYDSAHVLH
GRAIPFATGVKLANPELTLIVVGGDGDIAGIGGNHLLHAAKRNIDMITVMFTNFVYAMTGGQVAPTTPLGVKTTTTPHGN
PEPPLNIIKVVASLNANYVARASVTTPHYIEQFFYRALGMKGFRFIEVVSTCPEVYGRRIGLGDPVEMYNELKKRVKYKP
NPTIDEALIDWEKGIIIGEFTVRDNPSYLEIIRGLK
>Mature_275_residues
AVTPRYIHQLDKHLRLDRIPTLYCPGCGLGIGLGAMLRALDKRISEGVVDRNKVVWVGGIGCSARMAFYVSYDSAHVLHG
RAIPFATGVKLANPELTLIVVGGDGDIAGIGGNHLLHAAKRNIDMITVMFTNFVYAMTGGQVAPTTPLGVKTTTTPHGNP
EPPLNIIKVVASLNANYVARASVTTPHYIEQFFYRALGMKGFRFIEVVSTCPEVYGRRIGLGDPVEMYNELKKRVKYKPN
PTIDEALIDWEKGIIIGEFTVRDNPSYLEIIRGLK

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 30294; Mature: 30163

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTPRYIHQLDKHLRLDRIPTLYCPGCGLGIGLGAMLRALDKRISEGVVDRNKVVWVGG
CCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
IGCSARMAFYVSYDSAHVLHGRAIPFATGVKLANPELTLIVVGGDGDIAGIGGNHLLHAA
CCCCCEEEEEEEECCEEEEECCCCCCCCCCEECCCCEEEEEEECCCCEEECCCHHHHHHH
KRNIDMITVMFTNFVYAMTGGQVAPTTPLGVKTTTTPHGNPEPPLNIIKVVASLNANYVA
HCCCCEEEEEHHHHHEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEE
RASVTTPHYIEQFFYRALGMKGFRFIEVVSTCPEVYGRRIGLGDPVEMYNELKKRVKYKP
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
NPTIDEALIDWEKGIIIGEFTVRDNPSYLEIIRGLK
CCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCC
>Mature Secondary Structure 
AVTPRYIHQLDKHLRLDRIPTLYCPGCGLGIGLGAMLRALDKRISEGVVDRNKVVWVGG
CCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
IGCSARMAFYVSYDSAHVLHGRAIPFATGVKLANPELTLIVVGGDGDIAGIGGNHLLHAA
CCCCCEEEEEEEECCEEEEECCCCCCCCCCEECCCCEEEEEEECCCCEEECCCHHHHHHH
KRNIDMITVMFTNFVYAMTGGQVAPTTPLGVKTTTTPHGNPEPPLNIIKVVASLNANYVA
HCCCCEEEEEHHHHHEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEE
RASVTTPHYIEQFFYRALGMKGFRFIEVVSTCPEVYGRRIGLGDPVEMYNELKKRVKYKP
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
NPTIDEALIDWEKGIIIGEFTVRDNPSYLEIIRGLK
CCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]