| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is korA [H]
Identifier: 218883846
GI number: 218883846
Start: 502778
End: 503902
Strand: Reverse
Name: korA [H]
Synonym: DKAM_0535
Alternate gene names: 218883846
Gene position: 503902-502778 (Counterclockwise)
Preceding gene: 218883847
Following gene: 218883845
Centisome position: 36.91
GC content: 45.51
Gene sequence:
>1125_bases GTGAGGAAAACCTTTGCCTCTGGTAACATGGCTATCGCTGAAGCCGCTATAGTTGCTGGTTTAAAATTCTATGCAGGATA CCCTATCACGCCTAGCTCTGAGATAATGGAGTACCTTGCAGAGCATCTCCCAGGGCAAGGAGGCATCGTGATACAAATGG AGGATGAGATAGCCTCTATTAATGCCATAATAGGGGCATCATGGGCTGGAGCTAAGGCCATGACAGCTACCTCGGGCCCT GGATTATCGCTTATGGCCGAGGGAATAGGACTAGCTGTGATGAGTGAGACCCCAATAGTTATCGTGGACGTCATGAGGAC TGGGCCAAGTACTGGTGTACCGACAAAGACTACTCAGGCGGATGTTTTTCAAGTCAGGTGGCTGACACACGGAGACTATA TTATCCCTAGTTATATCCCCTGGAGTGTACAGGAGGCCTATGATTTAACAATTAAGGCTTTCAATACTGCTGAAAAACTT AGAACACCTGTAATACTCCTAAGCGATGCCGTGATAGCTCATCTATGGGAACCACTCGTTATCTATGAAAGAGGTGAGGT CGAGATCATTGAGAGGAGGAAACCTACTAGTAAAGATAATTATAAGCCATATATGCCCGGAGACGACCTGATTCCACCAA TGGCGTGTTTCGGGGAGGGCTATAACGTGCTTGTCGAATCATTAACTCATGATGAGAGAGGATACTATGCTCCTACAAAC ACGTATCACAAGAACAGCGTCTTGAGACTAATGCTTAAAATAGTGAAGAACATTAGCTACGTGTATGAACAGGAAACATA CATGGTTGACGATGCCGAGGTACTTCTGGTTTCATATGGTTCAACAGCTAGAACAGTTTATGCAGCAATAAGGGAGCTGA GGCGTAGAGGGGTTAAAGCCGGCATGCTCAGGCCGAAAACCCTCTGGCCATTAGACGAGGAGAGGATCTATAATAGTGTA TCAAGCAGGATAGATAGGGTGATTGTCGTAGAGAATAATATGGGTAAATTATTCCTCGATATGAAACGCATTTTTAGAGA TAGAGAGGTGTATTCAGCCCCCGTTGTAAGCCTTGAACTACCCACTGTGAAAGAAGTAATTGAGGCGGTGGAGCAATGGC TGTAA
Upstream 100 bases:
>100_bases ACCATCCCCCCGAGCCGGCACACATAGAGAAATGCATTGGTTGCAGGCTCTGCGAATACAACTGCCCCGATTTCGCTATA TTTGTGGAGGTGGCTTCAAA
Downstream 100 bases:
>100_bases CCCCTAGATACATACACCAGCTTGACAAACACCTTAGACTCGACAGGATACCCACATTATACTGTCCCGGATGCGGCCTT GGAATAGGATTAGGAGCCAT
Product: 2-oxoglutarate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MRKTFASGNMAIAEAAIVAGLKFYAGYPITPSSEIMEYLAEHLPGQGGIVIQMEDEIASINAIIGASWAGAKAMTATSGP GLSLMAEGIGLAVMSETPIVIVDVMRTGPSTGVPTKTTQADVFQVRWLTHGDYIIPSYIPWSVQEAYDLTIKAFNTAEKL RTPVILLSDAVIAHLWEPLVIYERGEVEIIERRKPTSKDNYKPYMPGDDLIPPMACFGEGYNVLVESLTHDERGYYAPTN TYHKNSVLRLMLKIVKNISYVYEQETYMVDDAEVLLVSYGSTARTVYAAIRELRRRGVKAGMLRPKTLWPLDEERIYNSV SSRIDRVIVVENNMGKLFLDMKRIFRDREVYSAPVVSLELPTVKEVIEAVEQWL
Sequences:
>Translated_374_residues MRKTFASGNMAIAEAAIVAGLKFYAGYPITPSSEIMEYLAEHLPGQGGIVIQMEDEIASINAIIGASWAGAKAMTATSGP GLSLMAEGIGLAVMSETPIVIVDVMRTGPSTGVPTKTTQADVFQVRWLTHGDYIIPSYIPWSVQEAYDLTIKAFNTAEKL RTPVILLSDAVIAHLWEPLVIYERGEVEIIERRKPTSKDNYKPYMPGDDLIPPMACFGEGYNVLVESLTHDERGYYAPTN TYHKNSVLRLMLKIVKNISYVYEQETYMVDDAEVLLVSYGSTARTVYAAIRELRRRGVKAGMLRPKTLWPLDEERIYNSV SSRIDRVIVVENNMGKLFLDMKRIFRDREVYSAPVVSLELPTVKEVIEAVEQWL >Mature_374_residues MRKTFASGNMAIAEAAIVAGLKFYAGYPITPSSEIMEYLAEHLPGQGGIVIQMEDEIASINAIIGASWAGAKAMTATSGP GLSLMAEGIGLAVMSETPIVIVDVMRTGPSTGVPTKTTQADVFQVRWLTHGDYIIPSYIPWSVQEAYDLTIKAFNTAEKL RTPVILLSDAVIAHLWEPLVIYERGEVEIIERRKPTSKDNYKPYMPGDDLIPPMACFGEGYNVLVESLTHDERGYYAPTN TYHKNSVLRLMLKIVKNISYVYEQETYMVDDAEVLLVSYGSTARTVYAAIRELRRRGVKAGMLRPKTLWPLDEERIYNSV SSRIDRVIVVENNMGKLFLDMKRIFRDREVYSAPVVSLELPTVKEVIEAVEQWL
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 41797; Mature: 41797
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTFASGNMAIAEAAIVAGLKFYAGYPITPSSEIMEYLAEHLPGQGGIVIQMEDEIASI CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHH NAIIGASWAGAKAMTATSGPGLSLMAEGIGLAVMSETPIVIVDVMRTGPSTGVPTKTTQA HHHEECCCCCCCEEEECCCCCCEEHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCC DVFQVRWLTHGDYIIPSYIPWSVQEAYDLTIKAFNTAEKLRTPVILLSDAVIAHLWEPLV CEEEEEEEECCCEECCCCCCCCHHHHHEEEEEEECCHHHHCCCEEEEHHHHHHHHCCCEE IYERGEVEIIERRKPTSKDNYKPYMPGDDLIPPMACFGEGYNVLVESLTHDERGYYAPTN EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCEECCCC TYHKNSVLRLMLKIVKNISYVYEQETYMVDDAEVLLVSYGSTARTVYAAIRELRRRGVKA CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCC GMLRPKTLWPLDEERIYNSVSSRIDRVIVVENNMGKLFLDMKRIFRDREVYSAPVVSLEL CCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEC PTVKEVIEAVEQWL CHHHHHHHHHHHCC >Mature Secondary Structure MRKTFASGNMAIAEAAIVAGLKFYAGYPITPSSEIMEYLAEHLPGQGGIVIQMEDEIASI CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHH NAIIGASWAGAKAMTATSGPGLSLMAEGIGLAVMSETPIVIVDVMRTGPSTGVPTKTTQA HHHEECCCCCCCEEEECCCCCCEEHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCC DVFQVRWLTHGDYIIPSYIPWSVQEAYDLTIKAFNTAEKLRTPVILLSDAVIAHLWEPLV CEEEEEEEECCCEECCCCCCCCHHHHHEEEEEEECCHHHHCCCEEEEHHHHHHHHCCCEE IYERGEVEIIERRKPTSKDNYKPYMPGDDLIPPMACFGEGYNVLVESLTHDERGYYAPTN EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCEECCCC TYHKNSVLRLMLKIVKNISYVYEQETYMVDDAEVLLVSYGSTARTVYAAIRELRRRGVKA CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCC GMLRPKTLWPLDEERIYNSVSSRIDRVIVVENNMGKLFLDMKRIFRDREVYSAPVVSLEL CCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEC PTVKEVIEAVEQWL CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9108258 [H]