| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is purP [H]
Identifier: 218883842
GI number: 218883842
Start: 499085
End: 500152
Strand: Direct
Name: purP [H]
Synonym: DKAM_0531
Alternate gene names: 218883842
Gene position: 499085-500152 (Clockwise)
Preceding gene: 218883841
Following gene: 218883843
Centisome position: 36.56
GC content: 46.44
Gene sequence:
>1068_bases ATGAACATCGATGAATTACTCAGGGGCTATGATACAGGTAACCTAGCGATCGGCACGCTTGCAAGTCACTCGGCACTACA GATAATGCATGGAGCTAAGAAGGAGGGATTCACTACAATCCTTGTGGCACTCAGGGATAGAGCATGGTTCTACAGGGACT TCGATCACCTAATAGATTTAATAATAGAGGTTAACTCATGGAGAGATATATGTAAGCCGGAGATCGTTGAGGAACTCAGG GGCTATAACACTATCCTGGTTCCACATGGAAGCTTCGTGGAGTATGTTGGCCTTGAATGCGGTGAATCTATAAACGTACC CCTATTCGGTACACGTAGCCTACTGAGGGTCGAGGCTGATCAAAAACTAAAAATGCTACTCCTCATGAAAGCTGGGATAC CTACCCCACGCGTCTACGAGTTAAGCGATGATGTAAGGGGGCCCGTAATAGTGAAGTTACCGGGTGCTAAGGGTGGTAAA GGATACTTCATTGCCTCAAGTAATAGTGAGATAGAGGCCAAGCTGAGGAAATATATTGAGGATGGCTTGCTAAGAAGCCC CAGGGAGGCAATCATACAGGAGTACATAGTAGGGGTCACAGCATACTTCCACTACTTCTACAGCCCGGTATTAAACAGAC TTGAGCTGCTTGGAGCCGATATAAGGTATGAAAGCGATGTTGATGGGCTACGTAGACTACCTGTTGGAATCCTAGAGGAA CTAGGCATCGATCCCACGTTCACTGTAGTGGGAAACCTACCACTAGTGTTAAGAGAGAGCCTGCTCCCAAAGATAATCGA GTACGGGAGGAGATTTGTAGATGCCTCACGTGGCATGGTTTCGCCAGGCGTTATAGGCCCATTCTGCCTTGAATCCGTTA TAGATAGAGAGTTGAATGTAAAGGTGTTTGAGTTCTCTGGGAGAATTGTGGCTGGGACAAACCTGTATATTGATGGAAGC CCGTATTCATACTTGTACTGGGATCAACCAGTTAGCATGGGTAGGAGAATAGCTATCGAGGTGAGGCTAGCCCTGGAGAA GGGGTTATTGGAAAAAATCGTTACATAA
Upstream 100 bases:
>100_bases AGTGCTTTGACTACTCGAAATACCTTGGCAACTACTCTGAGCTCATAGATAGAGTCTTGAAATATGTTAGAGAGCAGATT GAAGTAGGGAGCATGTGATT
Downstream 100 bases:
>100_bases TGTTTAATTCCACTCCCCATATAATTAGTTAAGTAGGGGTAGTTGAAGTGAGACTCGACTATAGGTTTATCAGTGTGGAT TTATTGAGAGCGTACAAGGA
Product: 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase
Products: NA
Alternate protein names: 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNIDELLRGYDTGNLAIGTLASHSALQIMHGAKKEGFTTILVALRDRAWFYRDFDHLIDLIIEVNSWRDICKPEIVEELR GYNTILVPHGSFVEYVGLECGESINVPLFGTRSLLRVEADQKLKMLLLMKAGIPTPRVYELSDDVRGPVIVKLPGAKGGK GYFIASSNSEIEAKLRKYIEDGLLRSPREAIIQEYIVGVTAYFHYFYSPVLNRLELLGADIRYESDVDGLRRLPVGILEE LGIDPTFTVVGNLPLVLRESLLPKIIEYGRRFVDASRGMVSPGVIGPFCLESVIDRELNVKVFEFSGRIVAGTNLYIDGS PYSYLYWDQPVSMGRRIAIEVRLALEKGLLEKIVT
Sequences:
>Translated_355_residues MNIDELLRGYDTGNLAIGTLASHSALQIMHGAKKEGFTTILVALRDRAWFYRDFDHLIDLIIEVNSWRDICKPEIVEELR GYNTILVPHGSFVEYVGLECGESINVPLFGTRSLLRVEADQKLKMLLLMKAGIPTPRVYELSDDVRGPVIVKLPGAKGGK GYFIASSNSEIEAKLRKYIEDGLLRSPREAIIQEYIVGVTAYFHYFYSPVLNRLELLGADIRYESDVDGLRRLPVGILEE LGIDPTFTVVGNLPLVLRESLLPKIIEYGRRFVDASRGMVSPGVIGPFCLESVIDRELNVKVFEFSGRIVAGTNLYIDGS PYSYLYWDQPVSMGRRIAIEVRLALEKGLLEKIVT >Mature_355_residues MNIDELLRGYDTGNLAIGTLASHSALQIMHGAKKEGFTTILVALRDRAWFYRDFDHLIDLIIEVNSWRDICKPEIVEELR GYNTILVPHGSFVEYVGLECGESINVPLFGTRSLLRVEADQKLKMLLLMKAGIPTPRVYELSDDVRGPVIVKLPGAKGGK GYFIASSNSEIEAKLRKYIEDGLLRSPREAIIQEYIVGVTAYFHYFYSPVLNRLELLGADIRYESDVDGLRRLPVGILEE LGIDPTFTVVGNLPLVLRESLLPKIIEYGRRFVDASRGMVSPGVIGPFCLESVIDRELNVKVFEFSGRIVAGTNLYIDGS PYSYLYWDQPVSMGRRIAIEVRLALEKGLLEKIVT
Specific function: Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates [H]
COG id: COG1759
COG function: function code R; ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR009720 - InterPro: IPR010672 - InterPro: IPR013817 [H]
Pfam domain/function: PF06849 DUF1246; PF06973 DUF1297 [H]
EC number: NA
Molecular weight: Translated: 39858; Mature: 39858
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDELLRGYDTGNLAIGTLASHSALQIMHGAKKEGFTTILVALRDRAWFYRDFDHLIDL CCHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHEEEHHHHCHHHHHHHHHHHHH IIEVNSWRDICKPEIVEELRGYNTILVPHGSFVEYVGLECGESINVPLFGTRSLLRVEAD HHHHCCCHHCCCHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCCCEECCCHHEEECCC QKLKMLLLMKAGIPTPRVYELSDDVRGPVIVKLPGAKGGKGYFIASSNSEIEAKLRKYIE HHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHH DGLLRSPREAIIQEYIVGVTAYFHYFYSPVLNRLELLGADIRYESDVDGLRRLPVGILEE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHH LGIDPTFTVVGNLPLVLRESLLPKIIEYGRRFVDASRGMVSPGVIGPFCLESVIDRELNV CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCE KVFEFSGRIVAGTNLYIDGSPYSYLYWDQPVSMGRRIAIEVRLALEKGLLEKIVT EEEEECCEEEECCEEEECCCCCEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHCC >Mature Secondary Structure MNIDELLRGYDTGNLAIGTLASHSALQIMHGAKKEGFTTILVALRDRAWFYRDFDHLIDL CCHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHEEEHHHHCHHHHHHHHHHHHH IIEVNSWRDICKPEIVEELRGYNTILVPHGSFVEYVGLECGESINVPLFGTRSLLRVEAD HHHHCCCHHCCCHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCCCEECCCHHEEECCC QKLKMLLLMKAGIPTPRVYELSDDVRGPVIVKLPGAKGGKGYFIASSNSEIEAKLRKYIE HHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHH DGLLRSPREAIIQEYIVGVTAYFHYFYSPVLNRLELLGADIRYESDVDGLRRLPVGILEE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHH LGIDPTFTVVGNLPLVLRESLLPKIIEYGRRFVDASRGMVSPGVIGPFCLESVIDRELNV CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCE KVFEFSGRIVAGTNLYIDGSPYSYLYWDQPVSMGRRIAIEVRLALEKGLLEKIVT EEEEECCEEEECCEEEECCCCCEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA