| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883647
Identifier: 218883647
GI number: 218883647
Start: 309025
End: 309804
Strand: Reverse
Name: 218883647
Synonym: DKAM_0336
Alternate gene names: NA
Gene position: 309804-309025 (Counterclockwise)
Preceding gene: 218883648
Following gene: 218883646
Centisome position: 22.69
GC content: 49.1
Gene sequence:
>780_bases TTGAGCATCCCGGCTAACCATCCACGTAGGGAAAGTCTACTCATAAGGGAGAAACTAGTCGAAGGATATAGGAGGAATAT TGTCGCGTTAGAAGGGTTGATAGCTCATGGAAGAGGTGAGTGCTTCGATTACTTACTCGGTGAGAAAACACATGGATTCG CTTTAAAAGCGATTAGAGCAGCCGTTGCACACTTACTCCTGGCCAAGCACCCCGTGATATCAGTCAACGGCAATACAGCG GCCCTGGTTCCACATGAAATAGTGGAGTTAGCCGAGGTCACTGGGGCAAAGCTCGAGGTAAACCTCTTCTACAGAACCCG TGAAAGAGAGGAAGCCATCGCCAAACACCTCATGGAGCACGGGGCACGTGAGGTATTGGGGGTCGGGGACGATGCATCAG CCACCATACCGGAGCTATTTAGCGAGAGAAGACGCGTCAGCCCTAGAGGCATATTGATCGCCGACGTGGTATTCGTCCCC TTGGAGGACGGGGATAGAACCGAGGCATTGAGGAAGATGGGTAAAACAGTTATAGCAGTGGACCTGAACCCTCTTTCCAG GACAGCCCGTATGGCATCTGTCACAATAGTTGACAATATTGTTAGGGCAGTACCATTAATGATTAAGGAGGCTATACAAC TGAAATCAATGAGCAGGGATAAGCTGGAGGAGATAGTTAGGAACTATGATAATAATAGGGTACTCCAAGAGGCATTGGAG ACCATACTGGGGAGACTCAGAGAGCTATCCTCTTCCCAACTAATTCTACGGCCATATTGA
Upstream 100 bases:
>100_bases ATCTGGGTTGAAAAAGAGTATGCCAGCGAGATACACGAGTTATTAAGTAGCAACGGGATAAAGGCATTTGAGACAACGAT ATCTGATAGAGGTGTAATGG
Downstream 100 bases:
>100_bases TGATGCATCCAAGCAATGATATCTGTGAAGAAAATACCTGGTATATGAAGCGGTTCATATAACAATAAATATAGCAGGCC CGGATAGAATCTAGTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRAAVAHLLLAKHPVISVNGNTA ALVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEHGAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVP LEDGDRTEALRKMGKTVIAVDLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALE TILGRLRELSSSQLILRPY
Sequences:
>Translated_259_residues MSIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRAAVAHLLLAKHPVISVNGNTA ALVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEHGAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVP LEDGDRTEALRKMGKTVIAVDLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALE TILGRLRELSSSQLILRPY >Mature_258_residues SIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRAAVAHLLLAKHPVISVNGNTAA LVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEHGAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVPL EDGDRTEALRKMGKTVIAVDLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALET ILGRLRELSSSQLILRPY
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent and ADP-producing reaction [H]
COG id: COG1701
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal pantothenate synthetase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002855 - ProDom: PD016827 [H]
Pfam domain/function: PF02006 DUF137 [H]
EC number: NA
Molecular weight: Translated: 28915; Mature: 28784
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHH AVAHLLLAKHPVISVNGNTAALVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEH HHHHHHHHCCCEEEECCCEEEECHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHC GAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVPLEDGDRTEALRKMGKTVIAV CHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCEEEEE DLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALE ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH TILGRLRELSSSQLILRPY HHHHHHHHCCCCCEEEECC >Mature Secondary Structure SIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHH AVAHLLLAKHPVISVNGNTAALVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEH HHHHHHHHCCCEEEECCCEEEECHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHC GAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVPLEDGDRTEALRKMGKTVIAV CHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCEEEEE DLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALE ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH TILGRLRELSSSQLILRPY HHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]