| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883648
Identifier: 218883648
GI number: 218883648
Start: 309788
End: 310630
Strand: Reverse
Name: 218883648
Synonym: DKAM_0337
Alternate gene names: NA
Gene position: 310630-309788 (Counterclockwise)
Preceding gene: 218883649
Following gene: 218883647
Centisome position: 22.75
GC content: 44.37
Gene sequence:
>843_bases TTGAAGATCAAGATACCCCTCCATGTCTCAGGCTTATGGATCCCCTCTATCTCGTCAAGTTATCTTGAGACAGGTAGCTA TGGTGCTGGATTAAACCTAGCCATGTATATAGAGGCCGATATAGTTGATGATAGAGAGTGCGGCATCTACATAAATAATG CTAGGGTTTTAGGGGAACAGTCAATGGAGATATGCAATAACACTGGTACTAGTATCTCAGTAAATGCATATTCACCCGTC TCACTGGGCAGGGGCTTCGGGATATCGGCTGGGTTACTCATAGCACATGCCCTGGCATCGTATCACGCATTAAAATATTC ATCAATGAAGGCTCTTCAATTAGCACATGTCCTTGAAGTAAAATACTTAACAGGCCTCGGCGATGTGTTATCCGAGTATA CAGGGGGGTTCGCTATACGTTTGAAGCCAGGGGCTCCAGGGGTGGGCATAGCCCATCGAGTCGTGGTTTTCGAGAAACCA GTACTTATTGTTGGCGAACTCTCAAGTGGTGAATCCACACAGGTGATGCTCTCCCGGATAACCAGCGAGCTATACGAGGT AGCGTTTTCATACTATAAGAAACTCGTGGAAAGCGAGGACTTACTCGACTTCTTTAACTACTCCCAGTTATTCACAAGGA AGGTATTCGATTACAGTGTAGTCGATAAAATACTGAGTGGTAGGAAGGGTATTATATCGTATTATCTTAAGAAATCCGCC CTAATCATCTGGGTTGAAAAAGAGTATGCCAGCGAGATACACGAGTTATTAAGTAGCAACGGGATAAAGGCATTTGAGAC AACGATATCTGATAGAGGTGTAATGGTTGAGCATCCCGGCTAA
Upstream 100 bases:
>100_bases GGGAGTGTAGTAAAGGAAGCTTAGGGCTCATCCAGCATGGGTGGATGCTCCTGCCTAGAGTAATCACGGAATTCCTCTCA TAGGAGTCCGGGTGTGTTTT
Downstream 100 bases:
>100_bases CCATCCACGTAGGGAAAGTCTACTCATAAGGGAGAAACTAGTCGAAGGATATAGGAGGAATATTGTCGCGTTAGAAGGGT TGATAGCTCATGGAAGAGGT
Product: kinase (sugar kinase superfamily)-like protein
Products: NA
Alternate protein names: Pantothenate Kinase; Kinase-Like Protein; Ghmp Kinase; Sugar Kinase; Kinase; Pantoate Kinase
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKIKIPLHVSGLWIPSISSSYLETGSYGAGLNLAMYIEADIVDDRECGIYINNARVLGEQSMEICNNTGTSISVNAYSPV SLGRGFGISAGLLIAHALASYHALKYSSMKALQLAHVLEVKYLTGLGDVLSEYTGGFAIRLKPGAPGVGIAHRVVVFEKP VLIVGELSSGESTQVMLSRITSELYEVAFSYYKKLVESEDLLDFFNYSQLFTRKVFDYSVVDKILSGRKGIISYYLKKSA LIIWVEKEYASEIHELLSSNGIKAFETTISDRGVMVEHPG
Sequences:
>Translated_280_residues MKIKIPLHVSGLWIPSISSSYLETGSYGAGLNLAMYIEADIVDDRECGIYINNARVLGEQSMEICNNTGTSISVNAYSPV SLGRGFGISAGLLIAHALASYHALKYSSMKALQLAHVLEVKYLTGLGDVLSEYTGGFAIRLKPGAPGVGIAHRVVVFEKP VLIVGELSSGESTQVMLSRITSELYEVAFSYYKKLVESEDLLDFFNYSQLFTRKVFDYSVVDKILSGRKGIISYYLKKSA LIIWVEKEYASEIHELLSSNGIKAFETTISDRGVMVEHPG >Mature_280_residues MKIKIPLHVSGLWIPSISSSYLETGSYGAGLNLAMYIEADIVDDRECGIYINNARVLGEQSMEICNNTGTSISVNAYSPV SLGRGFGISAGLLIAHALASYHALKYSSMKALQLAHVLEVKYLTGLGDVLSEYTGGFAIRLKPGAPGVGIAHRVVVFEKP VLIVGELSSGESTQVMLSRITSELYEVAFSYYKKLVESEDLLDFFNYSQLFTRKVFDYSVVDKILSGRKGIISYYLKKSA LIIWVEKEYASEIHELLSSNGIKAFETTISDRGVMVEHPG
Specific function: Unknown
COG id: COG1829
COG function: function code R; Predicted archaeal kinase (sugar kinase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30701; Mature: 30701
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKIPLHVSGLWIPSISSSYLETGSYGAGLNLAMYIEADIVDDRECGIYINNARVLGEQ CEEEEEEEEEEEECCCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCEEECCEEEECHH SMEICNNTGTSISVNAYSPVSLGRGFGISAGLLIAHALASYHALKYSSMKALQLAHVLEV HHHHHCCCCCEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYLTGLGDVLSEYTGGFAIRLKPGAPGVGIAHRVVVFEKPVLIVGELSSGESTQVMLSRI HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEEEEEECCEEEEEECCCCCHHHHHHHHH TSELYEVAFSYYKKLVESEDLLDFFNYSQLFTRKVFDYSVVDKILSGRKGIISYYLKKSA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCE LIIWVEKEYASEIHELLSSNGIKAFETTISDRGVMVEHPG EEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCC >Mature Secondary Structure MKIKIPLHVSGLWIPSISSSYLETGSYGAGLNLAMYIEADIVDDRECGIYINNARVLGEQ CEEEEEEEEEEEECCCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCEEECCEEEECHH SMEICNNTGTSISVNAYSPVSLGRGFGISAGLLIAHALASYHALKYSSMKALQLAHVLEV HHHHHCCCCCEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYLTGLGDVLSEYTGGFAIRLKPGAPGVGIAHRVVVFEKPVLIVGELSSGESTQVMLSRI HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEEEEEECCEEEEEECCCCCHHHHHHHHH TSELYEVAFSYYKKLVESEDLLDFFNYSQLFTRKVFDYSVVDKILSGRKGIISYYLKKSA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCE LIIWVEKEYASEIHELLSSNGIKAFETTISDRGVMVEHPG EEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA