| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883635
Identifier: 218883635
GI number: 218883635
Start: 297924
End: 298316
Strand: Direct
Name: 218883635
Synonym: DKAM_0324
Alternate gene names: NA
Gene position: 297924-298316 (Clockwise)
Preceding gene: 218883634
Following gene: 218883636
Centisome position: 21.82
GC content: 44.53
Gene sequence:
>393_bases ATGGTTAGAATAATAGTTGAAGCCGAGGTAAGGCCAACCGAGGACGCTGAGAAGGTGAAGAAGGCTGTGAAAAACATCTT CGCCGGGGATATAATAATCCAGGAACTAGGCAACAAGTACAGGGTGGTTAAAGGGGTCTCCCCCACTATTGAATCGTTGA AGCCATTGAAAAACCTCGCGAAAACCCAACAGGTTGAGCCAGCTCTGAAAAACTACCTTATTAAGTACAGGACCGCTACC TCAATAACTCTTTTACTACATAAGCAGGCTGCATACGCTGGGAAGCTCTCGCTAATAGATAGTGAGAAAGAATCACCACT AGGACCAGTGAAAATCATCATTGAGGGAGACGAGAACGAGCTAGAGGAGGTAGTTAAATACTTCTCAACTTAA
Upstream 100 bases:
>100_bases AGCGTGATAGCTCTAGCCGACTACATGATAGTTAATGAGTCAAGCATCGAGGATGCTAAAAAAGAAGCCGTTAGAATACT GAGGGAAGTGGTGGAGAAAC
Downstream 100 bases:
>100_bases AATCATTTATAATTCTAGACACTAGTATTATTGATAGGGAGAATAACATGGTGAGGATGGTTTTACCTGAAGCGAAAATA TTCAGGAAAATAATCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MVRIIVEAEVRPTEDAEKVKKAVKNIFAGDIIIQELGNKYRVVKGVSPTIESLKPLKNLAKTQQVEPALKNYLIKYRTAT SITLLLHKQAAYAGKLSLIDSEKESPLGPVKIIIEGDENELEEVVKYFST
Sequences:
>Translated_130_residues MVRIIVEAEVRPTEDAEKVKKAVKNIFAGDIIIQELGNKYRVVKGVSPTIESLKPLKNLAKTQQVEPALKNYLIKYRTAT SITLLLHKQAAYAGKLSLIDSEKESPLGPVKIIIEGDENELEEVVKYFST >Mature_130_residues MVRIIVEAEVRPTEDAEKVKKAVKNIFAGDIIIQELGNKYRVVKGVSPTIESLKPLKNLAKTQQVEPALKNYLIKYRTAT SITLLLHKQAAYAGKLSLIDSEKESPLGPVKIIIEGDENELEEVVKYFST
Specific function: Unknown
COG id: COG1931
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0201 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022803 - InterPro: IPR002739 [H]
Pfam domain/function: PF01877 DUF54 [H]
EC number: NA
Molecular weight: Translated: 14508; Mature: 14508
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIIVEAEVRPTEDAEKVKKAVKNIFAGDIIIQELGNKYRVVKGVSPTIESLKPLKNLA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH KTQQVEPALKNYLIKYRTATSITLLLHKQAAYAGKLSLIDSEKESPLGPVKIIIEGDENE HHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHHCCEEEECCCCCCCCCCEEEEEECCHHH LEEVVKYFST HHHHHHHHCC >Mature Secondary Structure MVRIIVEAEVRPTEDAEKVKKAVKNIFAGDIIIQELGNKYRVVKGVSPTIESLKPLKNLA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH KTQQVEPALKNYLIKYRTATSITLLLHKQAAYAGKLSLIDSEKESPLGPVKIIIEGDENE HHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHHCCEEEECCCCCCCCCCEEEEEECCHHH LEEVVKYFST HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA