| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is nfsA [C]
Identifier: 218883582
GI number: 218883582
Start: 248975
End: 249496
Strand: Direct
Name: nfsA [C]
Synonym: DKAM_0271
Alternate gene names: 218883582
Gene position: 248975-249496 (Clockwise)
Preceding gene: 218883577
Following gene: 218883584
Centisome position: 18.24
GC content: 48.85
Gene sequence:
>522_bases GTGAGCGAGATATTACTTGAGCTACTTAAATCGAGGCGCAGTATAAGAAGGTTCAAGCCTGAACCTCCGCCAAGAGACCT GGTCTTAAAAGCAATAGATGCAGCCAGGTATGCCCCGAGCGCTAGGAACAGCCAACCCTGGAGATTCATAATAATCGAGG ACCCGGTTATCAGGCAAAGGCTCGGCGGGATACATATATATGCGAGGCCAGTGTTAAATGCCCCCCTCGCAGTAGTGGTT GCATGCATGAATGAGGAATCACCAACATCATACCTCCTCGACTGCGCTAACGCAACAATATACTTCATGCTAGCAGCCCA CGCCCTTGGATTAGGCACAGTATGGATCCAGACACTAAGGAATGTAAAAGAGATCAGGGAGATACTTGGTCTCCCAGACA ATGTTACCCCGGTTTCCCTACTAGCTGTGGGATACCCTGCTGAAAACCCTGTCCTAAGACCGAGGAAGCCCCTAGAGGAA GTAGTCTACTTAAACAAGTATGGAGAGCCCTTAAAAATCTAG
Upstream 100 bases:
>100_bases GATCCAGCTATTATCGCCCAGTATTTAATAGGGTTATTGAACCGTTCAACAATTCCGCTTAAATAGCTTGGAAAACAATA TTTATCGCTGGTGATCACTG
Downstream 100 bases:
>100_bases TAGTAAGGTAATGAAGGGGCTTCCTCAGTAACCATTGCTATTTCATCAGCCCTCCTAAGGGATAGAACTGAGTAAATAGT GATCCCTAATGCTAGGACTC
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSEILLELLKSRRSIRRFKPEPPPRDLVLKAIDAARYAPSARNSQPWRFIIIEDPVIRQRLGGIHIYARPVLNAPLAVVV ACMNEESPTSYLLDCANATIYFMLAAHALGLGTVWIQTLRNVKEIREILGLPDNVTPVSLLAVGYPAENPVLRPRKPLEE VVYLNKYGEPLKI
Sequences:
>Translated_173_residues MSEILLELLKSRRSIRRFKPEPPPRDLVLKAIDAARYAPSARNSQPWRFIIIEDPVIRQRLGGIHIYARPVLNAPLAVVV ACMNEESPTSYLLDCANATIYFMLAAHALGLGTVWIQTLRNVKEIREILGLPDNVTPVSLLAVGYPAENPVLRPRKPLEE VVYLNKYGEPLKI >Mature_172_residues SEILLELLKSRRSIRRFKPEPPPRDLVLKAIDAARYAPSARNSQPWRFIIIEDPVIRQRLGGIHIYARPVLNAPLAVVVA CMNEESPTSYLLDCANATIYFMLAAHALGLGTVWIQTLRNVKEIREILGLPDNVTPVSLLAVGYPAENPVLRPRKPLEEV VYLNKYGEPLKI
Specific function: Reduction Of Nitroaromatic Compounds Using NADH. Reduces Nitrofurazone By A Ping-Pong Bi-Bi Mechanism Possibly To Generate A Two-Electron Transfer Product. Major Component Of The Oxygen- Insensitive Nitroreductase Activity In E.Coli. [C]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=184, Percent_Identity=33.1521739130435, Blast_Score=68, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 19475; Mature: 19344
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEILLELLKSRRSIRRFKPEPPPRDLVLKAIDAARYAPSARNSQPWRFIIIEDPVIRQR CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHH LGGIHIYARPVLNAPLAVVVACMNEESPTSYLLDCANATIYFMLAAHALGLGTVWIQTLR HCCEEEEECCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVKEIREILGLPDNVTPVSLLAVGYPAENPVLRPRKPLEEVVYLNKYGEPLKI HHHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure SEILLELLKSRRSIRRFKPEPPPRDLVLKAIDAARYAPSARNSQPWRFIIIEDPVIRQR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHH LGGIHIYARPVLNAPLAVVVACMNEESPTSYLLDCANATIYFMLAAHALGLGTVWIQTLR HCCEEEEECCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVKEIREILGLPDNVTPVSLLAVGYPAENPVLRPRKPLEEVVYLNKYGEPLKI HHHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]