| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883547
Identifier: 218883547
GI number: 218883547
Start: 218961
End: 219170
Strand: Reverse
Name: 218883547
Synonym: DKAM_0236
Alternate gene names: NA
Gene position: 219170-218961 (Counterclockwise)
Preceding gene: 218883553
Following gene: 218883541
Centisome position: 16.05
GC content: 51.9
Gene sequence:
>210_bases GTGGGCTCATGGGCGGCTGTCGAGCCCAACGGCACGGGGCTCCCATCTAGACTTAACCAACCCAGGCTTGGAGCATTGCT CCCACCGCCTAGGCAGGCTCTTAGCTACAACAGCCCAGTTCATCAAAACGCTTACATGCTTCCCTGGGGAAGCAATCTCT CCGACATAGACAATATTACCAACATAAAAAGATACTGGCTTTGTAGTTAA
Upstream 100 bases:
>100_bases AAGTTCCGTTTGTCCCTACACCTTCATTTCGATTACTTTACATCCGTTCATGATCAGGTGTAGGGACTTCCGCCTCGCCC ACAGGGCTTTGGGTACCCGT
Downstream 100 bases:
>100_bases ACCTAGTAGCTTGAGACAAGTAGTCTTGTATACTCGTTTCTCGGGTTCTTGATTATAGAATCTATATCACCCTCCTCAAT TATTTCGCCTCTATATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MGSWAAVEPNGTGLPSRLNQPRLGALLPPPRQALSYNSPVHQNAYMLPWGSNLSDIDNITNIKRYWLCS
Sequences:
>Translated_69_residues MGSWAAVEPNGTGLPSRLNQPRLGALLPPPRQALSYNSPVHQNAYMLPWGSNLSDIDNITNIKRYWLCS >Mature_68_residues GSWAAVEPNGTGLPSRLNQPRLGALLPPPRQALSYNSPVHQNAYMLPWGSNLSDIDNITNIKRYWLCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7650; Mature: 7519
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSWAAVEPNGTGLPSRLNQPRLGALLPPPRQALSYNSPVHQNAYMLPWGSNLSDIDNIT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCHHCC NIKRYWLCS CCCEEEECC >Mature Secondary Structure GSWAAVEPNGTGLPSRLNQPRLGALLPPPRQALSYNSPVHQNAYMLPWGSNLSDIDNIT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCHHCC NIKRYWLCS CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA