| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883536
Identifier: 218883536
GI number: 218883536
Start: 208442
End: 209545
Strand: Reverse
Name: 218883536
Synonym: DKAM_0225
Alternate gene names: NA
Gene position: 209545-208442 (Counterclockwise)
Preceding gene: 218883539
Following gene: 218883533
Centisome position: 15.35
GC content: 47.55
Gene sequence:
>1104_bases ATGGTGGACCCCAGGATCTCTAATCTAGCCCGCCTTATAGTCAACTATTGTGTATATCTGAGGAAAGGGGAAGAAGTCGT AATCAATGCCTCAGTTGAATCAATACCGTTGGTCAGAGAGATAGTCAGATATACCGTGGAGGCCGGGGCTTACCCAGTAT TCATAAATATAGGTGATGAATCAATAACCGAGGCATTCTACAAGTATGCACCACAAGAAGTCCTCTCACATGTAAGCATA CTCGAGAAGGAAATCGTGTCGAGAGTGAACGCGCAGATAAGCATACTCTCACCATCCCACACTAAGCCGCTTATCGGAAT AGACCCGGAGAAGCTTAAGGTGAGGAGTCAGGCTAGAAGGGAGCTAAATAAAATATACTTGGAGAGAAGCGCGAAGGGTG AGCTGAAATGGGTTATAGCCCCATATCCAACGAGGGCATTAGCCCAGGAAGCCGGTATGAGTATAAGTGAATACGAAGAC TTCGTCTACCACGCCACATACGCTGACTCAGCTGACCCGGTATCTGTGTGGAGCGAGATCGGGAAGAGACAGCAGAGGAT AGCTGAGTTCCTGAATAAGGCCAGGGAGATAAGATACGTGGGCCCCGGGATAGACCTCTATCTACGCGTGGATGGAAGAA CATGGATTAATGATGATGGACACTACAATATGCCTGGTGGCGAGGTATTCTCAGCCCCTGTAGAGGATAGTGTCGAGGGA TATGTGGAGTTCGAGTATCCGGCCATATGGCGTGGTGTAGAAGTAGAAGGTGTTAAATTGGTCTTCAGAAAAGGCGAGGT AGTAGAGGCTACCGCTAGACGCGGCGAGGCATTTTTAAAGAAGATGCTTGAAACGGATGATGGAGCCAGGAAAGTGGGTG AGATAGCATTCGGGTTGAACTATAATATAACCAGGTTCACTAAGGAAATACTGTTCGACGAGAAGATCGGGGGCACAATA CATCTAGCCCTAGGTTCGGCTTACCCTGAGACAGGTGGGAGGAATGTTTCAGCAATACACTGGGATATGATTAAGGACAT GAGGAACGCGAAGGTCTACGTGGATAACGAGTTAATCTATGAAAACGGTCGGTTCATAATCTAG
Upstream 100 bases:
>100_bases GTTCAACTGCTTATTTAATGCCTCGATTAACTCAGGGTGCATATGGGACACCTAAAATTATTTTATTGTATTCGATCATT TTAAATCATTGGTGTATTGC
Downstream 100 bases:
>100_bases CCTGTTGCGGGTTGAAGCTTTTCATAGATCGTTTTCCCACTCACTATATCGCTTAACCCGGTTTTATCCTCTATAATAAC AGTATAGCTGATCAGCCCAT
Product: peptidase M29, aminopeptidase II
Products: NA
Alternate protein names: Aminopeptidase II; AP-II [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MVDPRISNLARLIVNYCVYLRKGEEVVINASVESIPLVREIVRYTVEAGAYPVFINIGDESITEAFYKYAPQEVLSHVSI LEKEIVSRVNAQISILSPSHTKPLIGIDPEKLKVRSQARRELNKIYLERSAKGELKWVIAPYPTRALAQEAGMSISEYED FVYHATYADSADPVSVWSEIGKRQQRIAEFLNKAREIRYVGPGIDLYLRVDGRTWINDDGHYNMPGGEVFSAPVEDSVEG YVEFEYPAIWRGVEVEGVKLVFRKGEVVEATARRGEAFLKKMLETDDGARKVGEIAFGLNYNITRFTKEILFDEKIGGTI HLALGSAYPETGGRNVSAIHWDMIKDMRNAKVYVDNELIYENGRFII
Sequences:
>Translated_367_residues MVDPRISNLARLIVNYCVYLRKGEEVVINASVESIPLVREIVRYTVEAGAYPVFINIGDESITEAFYKYAPQEVLSHVSI LEKEIVSRVNAQISILSPSHTKPLIGIDPEKLKVRSQARRELNKIYLERSAKGELKWVIAPYPTRALAQEAGMSISEYED FVYHATYADSADPVSVWSEIGKRQQRIAEFLNKAREIRYVGPGIDLYLRVDGRTWINDDGHYNMPGGEVFSAPVEDSVEG YVEFEYPAIWRGVEVEGVKLVFRKGEVVEATARRGEAFLKKMLETDDGARKVGEIAFGLNYNITRFTKEILFDEKIGGTI HLALGSAYPETGGRNVSAIHWDMIKDMRNAKVYVDNELIYENGRFII >Mature_367_residues MVDPRISNLARLIVNYCVYLRKGEEVVINASVESIPLVREIVRYTVEAGAYPVFINIGDESITEAFYKYAPQEVLSHVSI LEKEIVSRVNAQISILSPSHTKPLIGIDPEKLKVRSQARRELNKIYLERSAKGELKWVIAPYPTRALAQEAGMSISEYED FVYHATYADSADPVSVWSEIGKRQQRIAEFLNKAREIRYVGPGIDLYLRVDGRTWINDDGHYNMPGGEVFSAPVEDSVEG YVEFEYPAIWRGVEVEGVKLVFRKGEVVEATARRGEAFLKKMLETDDGARKVGEIAFGLNYNITRFTKEILFDEKIGGTI HLALGSAYPETGGRNVSAIHWDMIKDMRNAKVYVDNELIYENGRFII
Specific function: Broad specificity metal-dependent exopeptidase, releasing all N-terminal amino acids [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 41551; Mature: 41551
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDPRISNLARLIVNYCVYLRKGEEVVINASVESIPLVREIVRYTVEAGAYPVFINIGDE CCCCHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCH SITEAFYKYAPQEVLSHVSILEKEIVSRVNAQISILSPSHTKPLIGIDPEKLKVRSQARR HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCHHHHHHHHHHHH ELNKIYLERSAKGELKWVIAPYPTRALAQEAGMSISEYEDFVYHATYADSADPVSVWSEI HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHEEEEECCCCCCHHHHHHHH GKRQQRIAEFLNKAREIRYVGPGIDLYLRVDGRTWINDDGHYNMPGGEVFSAPVEDSVEG HHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCEEECCCCCCCCCCCCEEECCCCCCCCC YVEFEYPAIWRGVEVEGVKLVFRKGEVVEATARRGEAFLKKMLETDDGARKVGEIAFGLN EEEEECCCEECCCEECCEEEEEECCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCC YNITRFTKEILFDEKIGGTIHLALGSAYPETGGRNVSAIHWDMIKDMRNAKVYVDNELIY CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHCCCEEEECCEEEE ENGRFII ECCCEEC >Mature Secondary Structure MVDPRISNLARLIVNYCVYLRKGEEVVINASVESIPLVREIVRYTVEAGAYPVFINIGDE CCCCHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCH SITEAFYKYAPQEVLSHVSILEKEIVSRVNAQISILSPSHTKPLIGIDPEKLKVRSQARR HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCHHHHHHHHHHHH ELNKIYLERSAKGELKWVIAPYPTRALAQEAGMSISEYEDFVYHATYADSADPVSVWSEI HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHEEEEECCCCCCHHHHHHHH GKRQQRIAEFLNKAREIRYVGPGIDLYLRVDGRTWINDDGHYNMPGGEVFSAPVEDSVEG HHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCEEECCCCCCCCCCCCEEECCCCCCCCC YVEFEYPAIWRGVEVEGVKLVFRKGEVVEATARRGEAFLKKMLETDDGARKVGEIAFGLN EEEEECCCEECCCEECCEEEEEECCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCC YNITRFTKEILFDEKIGGTIHLALGSAYPETGGRNVSAIHWDMIKDMRNAKVYVDNELIY CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHCCCEEEECCEEEE ENGRFII ECCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117; 938681 [H]