| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883529
Identifier: 218883529
GI number: 218883529
Start: 202779
End: 203777
Strand: Reverse
Name: 218883529
Synonym: DKAM_0218
Alternate gene names: NA
Gene position: 203777-202779 (Counterclockwise)
Preceding gene: 218883531
Following gene: 218883528
Centisome position: 14.93
GC content: 44.84
Gene sequence:
>999_bases ATGAAGCTTGTAAAAGTAGATGATGCAGTAGGTAGGAAGCTGGCATTCGATTACTCGGCTGTTACACCGGATTTCAAGTC ACCGATTAAAAGACGCGGTGAAGTAGTAAGTCTTGAAGATGTTGAGTTACTAAAGAATCACGGCCACTACTACGTGTATA TTGAGGATGGAGACAGCGTAGAGTACGGCTTACACGAAGAGGAGGCTGTGCTACAGCTTGCCCAATTAATCTCAGGGGAA AATATCATAGTTGAGAAGGCGTCTGAGGGAAAAGCACTACTTAGGTCAGCCGTGAATGGGTTACTCATGGTTGACTCAAC TCTACTCGAGAAAATCAATTCTACAGGAGTATACGTCGTCATAACTAGACGTAAAGGCGTATATGTGAAGCACTCAGATA TAGTCGGCATTGTCGATTTAATACCTCTAAGTATCCCCAGGGATTATCTCTCATACATATCAAGTGAAATACTTACATCA CGTAAAATCCTACAGGTCTACAGGAATACACACCCAAAGATAGGTATTATTGTAACAGGAACAGAGATCGTGGAGGGAAG GAAGAAGGATCTTGCATCCCCGGTTGTCGTTGAGAAGATACGGTTATATGAATTAGAGCAGGGGGCACTAGTATATGTCC GGGATGACGAATCCGAGATAGCGGGAGCCATTGAAAACCTATTACTCGACCATGATGCAGTAGTTGTCACCGGAGGTATG AGTATTGATCCAACTGATAAAACACCAAAGGCTATAGCCAGTGTAGCCAGCGAGGTAGTAGCCTACGGTGTTCCAATGAA GCCGACCACCATGAGCATGATTGCGTATAAGGATGGGAAAGCCGTAATAGGGGTTTCAAGCGGAATAATATATTTCCCAG ACTACAATATCCTAGACGTAGTGCTACCGTGGATAGCGGCCGGTGTAAAAATCCCGAGGGAGTATCTGATCTCATTTGGT GAGGGAGGGTTGTCCGAGTACTTTCTACGAAGGCGGTGA
Upstream 100 bases:
>100_bases TGATAAATCTTGATTTGACTATTAATTATTGGACAAAAATATATATTTCTCAGCATAGTTGTCTAATAATTAATAGTCAG ATAATATGAGTTGATTTTAT
Downstream 100 bases:
>100_bases GACATTATGAAGCCTACGTCTAAGACAATAGTTTTAAGCATGATACTACTGCTTTTAGTGGTATCCTCATGGATTATCTA CACGTATTACTCACAGAGTC
Product: molybdopterin binding domain-containing protein
Products: NA
Alternate protein names: Formylmethanofuran Dehydrogenase Subunit E Region; 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Synthase; Molybdenum Cofactor Cytidylyltransferase; Molybdenum Cofactor Biosynthesis Protein; Molybdopterin Biosynthesis; Molybdenum Cofactor Synthesis Domain Protein; Formylmethanofuran Dehydrogenase Subunit E; Molybdopterin Biosynthesis Protein MoeA; Molybdenum Cofactor Biosynthesis Family Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKLVKVDDAVGRKLAFDYSAVTPDFKSPIKRRGEVVSLEDVELLKNHGHYYVYIEDGDSVEYGLHEEEAVLQLAQLISGE NIIVEKASEGKALLRSAVNGLLMVDSTLLEKINSTGVYVVITRRKGVYVKHSDIVGIVDLIPLSIPRDYLSYISSEILTS RKILQVYRNTHPKIGIIVTGTEIVEGRKKDLASPVVVEKIRLYELEQGALVYVRDDESEIAGAIENLLLDHDAVVVTGGM SIDPTDKTPKAIASVASEVVAYGVPMKPTTMSMIAYKDGKAVIGVSSGIIYFPDYNILDVVLPWIAAGVKIPREYLISFG EGGLSEYFLRRR
Sequences:
>Translated_332_residues MKLVKVDDAVGRKLAFDYSAVTPDFKSPIKRRGEVVSLEDVELLKNHGHYYVYIEDGDSVEYGLHEEEAVLQLAQLISGE NIIVEKASEGKALLRSAVNGLLMVDSTLLEKINSTGVYVVITRRKGVYVKHSDIVGIVDLIPLSIPRDYLSYISSEILTS RKILQVYRNTHPKIGIIVTGTEIVEGRKKDLASPVVVEKIRLYELEQGALVYVRDDESEIAGAIENLLLDHDAVVVTGGM SIDPTDKTPKAIASVASEVVAYGVPMKPTTMSMIAYKDGKAVIGVSSGIIYFPDYNILDVVLPWIAAGVKIPREYLISFG EGGLSEYFLRRR >Mature_332_residues MKLVKVDDAVGRKLAFDYSAVTPDFKSPIKRRGEVVSLEDVELLKNHGHYYVYIEDGDSVEYGLHEEEAVLQLAQLISGE NIIVEKASEGKALLRSAVNGLLMVDSTLLEKINSTGVYVVITRRKGVYVKHSDIVGIVDLIPLSIPRDYLSYISSEILTS RKILQVYRNTHPKIGIIVTGTEIVEGRKKDLASPVVVEKIRLYELEQGALVYVRDDESEIAGAIENLLLDHDAVVVTGGM SIDPTDKTPKAIASVASEVVAYGVPMKPTTMSMIAYKDGKAVIGVSSGIIYFPDYNILDVVLPWIAAGVKIPREYLISFG EGGLSEYFLRRR
Specific function: Unknown
COG id: COG0303
COG function: function code H; Molybdopterin biosynthesis enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36587; Mature: 36587
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVKVDDAVGRKLAFDYSAVTPDFKSPIKRRGEVVSLEDVELLKNHGHYYVYIEDGDSV CEEEECCHHHCCEEEECCCCCCCCHHHHHHHCCCEEEHHHHHHHHCCCCEEEEEECCCCE EYGLHEEEAVLQLAQLISGENIIVEKASEGKALLRSAVNGLLMVDSTLLEKINSTGVYVV ECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCEEEECHHHHHHHCCCCEEEE ITRRKGVYVKHSDIVGIVDLIPLSIPRDYLSYISSEILTSRKILQVYRNTHPKIGIIVTG EEECCCEEEECCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC TEIVEGRKKDLASPVVVEKIRLYELEQGALVYVRDDESEIAGAIENLLLDHDAVVVTGGM HHHHCCHHHHCCCCHHHHHHHEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCC SIDPTDKTPKAIASVASEVVAYGVPMKPTTMSMIAYKDGKAVIGVSSGIIYFPDYNILDV EECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECCCEEECCCCCHHHH VLPWIAAGVKIPREYLISFGEGGLSEYFLRRR HHHHHHHCCCCCHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MKLVKVDDAVGRKLAFDYSAVTPDFKSPIKRRGEVVSLEDVELLKNHGHYYVYIEDGDSV CEEEECCHHHCCEEEECCCCCCCCHHHHHHHCCCEEEHHHHHHHHCCCCEEEEEECCCCE EYGLHEEEAVLQLAQLISGENIIVEKASEGKALLRSAVNGLLMVDSTLLEKINSTGVYVV ECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCEEEECHHHHHHHCCCCEEEE ITRRKGVYVKHSDIVGIVDLIPLSIPRDYLSYISSEILTSRKILQVYRNTHPKIGIIVTG EEECCCEEEECCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC TEIVEGRKKDLASPVVVEKIRLYELEQGALVYVRDDESEIAGAIENLLLDHDAVVVTGGM HHHHCCHHHHCCCCHHHHHHHEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCC SIDPTDKTPKAIASVASEVVAYGVPMKPTTMSMIAYKDGKAVIGVSSGIIYFPDYNILDV EECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECCCEEECCCCCHHHH VLPWIAAGVKIPREYLISFGEGGLSEYFLRRR HHHHHHHCCCCCHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA