| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is iorA [H]
Identifier: 218532866
GI number: 218532866
Start: 5334210
End: 5334695
Strand: Reverse
Name: iorA [H]
Synonym: Mchl_4989
Alternate gene names: 218532866
Gene position: 5334695-5334210 (Counterclockwise)
Preceding gene: 218532867
Following gene: 218532865
Centisome position: 92.33
GC content: 66.87
Gene sequence:
>486_bases ATGACAGCGATGATAAAACTCACGGTCAACGGAGCCGAACGCAGCTTCGACGGCGATCCCGAAATGCCGTTGCTCTGGTA CCTGCGCGACGAACTTGGCCTCACCGGCACCAAGTTCGGCTGCGGCATCGCCCAGTGCGGCGCCTGCACGGTCCATCTCG GCGGAACCGCCGCGCGGGCCTGCATCACCCCCGTCTCCGCGGCGGAAGGCCAGGAGATCACGACGATCGAGGGGCTCTCG CCCGACGGCAACCACCCGGTTCAGGTGGCGTGGCGCGACCTCAACGTCGCCCAGTGCGGCTACTGCCAGACCGGTCAGAT CATGCAGGCGGCGTCCCTCCTCAAGGACAGCCCGAAGCCGACCGACCAGCAGATCGACGAGAACATGAGCGGCAACATCT GCCGCTGCGGCACCTATCCACGCATCCGCGCCGCGATCCATCAGGCTGCCGGTCAGGCGCCCGCCACCAAGGGAGATCGC CTGTGA
Upstream 100 bases:
>100_bases TTCGGGCCGGTCCCGTACGGCATCCCTGGGGACGGCAGATCGATCTGGCCGCCGGGCGGGCATTCCTTCCGCTCGCGCGC CCTCCATCCTGAAACGGCAG
Downstream 100 bases:
>100_bases TTCACGAAGCCAAGCTGATGGTCGAACTCGCCGCCTCGCAGAACGCCGCCGGCCCGGTCCGGATCGACAATGTCAGCCGC CGCGGCATCCTCGGCGGCAT
Product: (2Fe-2S)-binding domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTAMIKLTVNGAERSFDGDPEMPLLWYLRDELGLTGTKFGCGIAQCGACTVHLGGTAARACITPVSAAEGQEITTIEGLS PDGNHPVQVAWRDLNVAQCGYCQTGQIMQAASLLKDSPKPTDQQIDENMSGNICRCGTYPRIRAAIHQAAGQAPATKGDR L
Sequences:
>Translated_161_residues MTAMIKLTVNGAERSFDGDPEMPLLWYLRDELGLTGTKFGCGIAQCGACTVHLGGTAARACITPVSAAEGQEITTIEGLS PDGNHPVQVAWRDLNVAQCGYCQTGQIMQAASLLKDSPKPTDQQIDENMSGNICRCGTYPRIRAAIHQAAGQAPATKGDR L >Mature_160_residues TAMIKLTVNGAERSFDGDPEMPLLWYLRDELGLTGTKFGCGIAQCGACTVHLGGTAARACITPVSAAEGQEITTIEGLSP DGNHPVQVAWRDLNVAQCGYCQTGQIMQAASLLKDSPKPTDQQIDENMSGNICRCGTYPRIRAAIHQAAGQAPATKGDRL
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=135, Percent_Identity=40, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI71773480, Length=133, Percent_Identity=36.0902255639098, Blast_Score=74, Evalue=5e-14, Organism=Escherichia coli, GI1786480, Length=164, Percent_Identity=45.1219512195122, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1789232, Length=144, Percent_Identity=39.5833333333333, Blast_Score=91, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17539860, Length=155, Percent_Identity=38.0645161290323, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17540638, Length=145, Percent_Identity=38.6206896551724, Blast_Score=109, Evalue=6e-25, Organism=Caenorhabditis elegans, GI32566215, Length=161, Percent_Identity=36.6459627329193, Blast_Score=106, Evalue=5e-24, Organism=Drosophila melanogaster, GI17737937, Length=151, Percent_Identity=35.0993377483444, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24647193, Length=161, Percent_Identity=34.7826086956522, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647195, Length=162, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647197, Length=162, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647201, Length=154, Percent_Identity=30.5194805194805, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24647199, Length=155, Percent_Identity=32.258064516129, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17050; Mature: 16918
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMIKLTVNGAERSFDGDPEMPLLWYLRDELGLTGTKFGCGIAQCGACTVHLGGTAARA CCEEEEEEECCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCEEEEEECCCHHHH CITPVSAAEGQEITTIEGLSPDGNHPVQVAWRDLNVAQCGYCQTGQIMQAASLLKDSPKP HHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC TDQQIDENMSGNICRCGTYPRIRAAIHQAAGQAPATKGDRL CHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TAMIKLTVNGAERSFDGDPEMPLLWYLRDELGLTGTKFGCGIAQCGACTVHLGGTAARA CEEEEEEECCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCEEEEEECCCHHHH CITPVSAAEGQEITTIEGLSPDGNHPVQVAWRDLNVAQCGYCQTGQIMQAASLLKDSPKP HHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC TDQQIDENMSGNICRCGTYPRIRAAIHQAAGQAPATKGDRL CHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]