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The map label for this gene is dedA [C]

Identifier: 218532843

GI number: 218532843

Start: 5305811

End: 5306455

Strand: Reverse

Name: dedA [C]

Synonym: Mchl_4966

Alternate gene names: 218532843

Gene position: 5306455-5305811 (Counterclockwise)

Preceding gene: 218532844

Following gene: 218532838

Centisome position: 91.84

GC content: 69.15

Gene sequence:

>645_bases
ATGTCCTTCCTTCAGGGACTTCCGATCGCCGACCTCATCGCCCATTACGGCTACCTCGCCGTCTTCGTCGTCGTCGCGCT
GGAGAGCGCGGGCGTGCCGATGCCGGGCGAGACCATCCTGATCTCGTCGGCCGTCTATGCCGGCAGCACCGGCAGCCTCA
ACGTCGTCCTCATCGTCGCCGCCGCGGCCGCGGCCGCGATCCTCGGCGACAATGTCGGCTACTGGGTCGGGCGCCGCTGG
GGCATGCCGCTGCTGCTGCGCTACGGCCACCTCATCGCCCTCGACCACGGCCGGCTGAAGCTCGGGCAATACCTGTTCCG
GGAGCATGGCGGGAAAATCGTGTTCTTCGGCCGCTTCACCGCGATGCTGCGCGCCTACGCAGCGGTGCTGGCCGGCGTGA
ACCGGCTCGATGCGCGCCGCTTCATGCTGTTTAACGGCCTCGGCGGCGTCGCCTGGGCCGGGATCATGGGCTTCGGCGCC
TATGCCTGCGGCCGCTCGATCGAGCACATCGTCGGCCCCGTCGGCCTCGCGCTGCTGGCCTTCGTGGTCTTCGGTGGACT
GGCGCTCTGGCTGTTCATGAAGCGCCACGAGGAGCGGCTGCTGCTGAAGGCGGAAGCCGCGATCCCCGGCCCGCTGACGC
ACTGA

Upstream 100 bases:

>100_bases
CTGAAGCGGAGGGGCAAGGGGAGGGAGAAGGGCCGCCCTCCTGCGGCCACGTTCCTGGCCAGACTGCGCCGCGCAACGAT
CCGCGGAGACGCCCTCTTTC

Downstream 100 bases:

>100_bases
TCTTTTTCGAAGACAGACCACGACGGCAATCGATGCGAGCCCCTCGCCCCGCACGCGGGGAGAGGGCTTCGGCGACCACA
GAACTCGGGTGTTCCCGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSFLQGLPIADLIAHYGYLAVFVVVALESAGVPMPGETILISSAVYAGSTGSLNVVLIVAAAAAAAILGDNVGYWVGRRW
GMPLLLRYGHLIALDHGRLKLGQYLFREHGGKIVFFGRFTAMLRAYAAVLAGVNRLDARRFMLFNGLGGVAWAGIMGFGA
YACGRSIEHIVGPVGLALLAFVVFGGLALWLFMKRHEERLLLKAEAAIPGPLTH

Sequences:

>Translated_214_residues
MSFLQGLPIADLIAHYGYLAVFVVVALESAGVPMPGETILISSAVYAGSTGSLNVVLIVAAAAAAAILGDNVGYWVGRRW
GMPLLLRYGHLIALDHGRLKLGQYLFREHGGKIVFFGRFTAMLRAYAAVLAGVNRLDARRFMLFNGLGGVAWAGIMGFGA
YACGRSIEHIVGPVGLALLAFVVFGGLALWLFMKRHEERLLLKAEAAIPGPLTH
>Mature_213_residues
SFLQGLPIADLIAHYGYLAVFVVVALESAGVPMPGETILISSAVYAGSTGSLNVVLIVAAAAAAAILGDNVGYWVGRRWG
MPLLLRYGHLIALDHGRLKLGQYLFREHGGKIVFFGRFTAMLRAYAAVLAGVNRLDARRFMLFNGLGGVAWAGIMGFGAY
ACGRSIEHIVGPVGLALLAFVVFGGLALWLFMKRHEERLLLKAEAAIPGPLTH

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=163, Percent_Identity=29.4478527607362, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789481, Length=156, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI87082056, Length=161, Percent_Identity=31.055900621118, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22850; Mature: 22719

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLQGLPIADLIAHYGYLAVFVVVALESAGVPMPGETILISSAVYAGSTGSLNVVLIVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCCCHHHHHHH
AAAAAAILGDNVGYWVGRRWGMPLLLRYGHLIALDHGRLKLGQYLFREHGGKIVFFGRFT
HHHHHHHHCCCCCHHHHHHCCCHHHHHCCCEEEECCCHHHHHHHHHHHCCCEEEEEHHHH
AMLRAYAAVLAGVNRLDARRFMLFNGLGGVAWAGIMGFGAYACGRSIEHIVGPVGLALLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FVVFGGLALWLFMKRHEERLLLKAEAAIPGPLTH
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
>Mature Secondary Structure 
SFLQGLPIADLIAHYGYLAVFVVVALESAGVPMPGETILISSAVYAGSTGSLNVVLIVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCCCHHHHHHH
AAAAAAILGDNVGYWVGRRWGMPLLLRYGHLIALDHGRLKLGQYLFREHGGKIVFFGRFT
HHHHHHHHCCCCCHHHHHHCCCHHHHHCCCEEEECCCHHHHHHHHHHHCCCEEEEEHHHH
AMLRAYAAVLAGVNRLDARRFMLFNGLGGVAWAGIMGFGAYACGRSIEHIVGPVGLALLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FVVFGGLALWLFMKRHEERLLLKAEAAIPGPLTH
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]