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The map label for this gene is 218532804

Identifier: 218532804

GI number: 218532804

Start: 5255155

End: 5255688

Strand: Reverse

Name: 218532804

Synonym: Mchl_4927

Alternate gene names: NA

Gene position: 5255688-5255155 (Counterclockwise)

Preceding gene: 218532805

Following gene: 218532799

Centisome position: 90.96

GC content: 66.48

Gene sequence:

>534_bases
ATGTCGGAAACCAATCAGGTCACGCAACACGACCGTATCGAACTCGCGGCCGATCTCGTCTCGGCTTATGTCTCCAACAA
CTCTCTGCCGTCGCCTGAACTCGCGGGCTTGATTGTTCAGGTTCATGCGGCCCTGGTCGCCCTGTCGGCACCGCAGGCGC
CCAAGGAAGAAGAAGTCGAGCGGGCGACACCGGCCCAGATCAAGAAGTCGATCACGCCGGATGCCTTGATCTCCTTCATC
GACGGCAAGCCTTACAAGACGCTCAAGCGGCACCTGACCACGCACGGCCTCGACATCGACGGCTACCGCCGCCGCTACGG
CCTGCCGGCCGACTATCCGACGGTCTCGTCCAACTATTCGGCCGCGCGCTCGGCCCTCGCCAAGGATCTCGGCCTCGGCC
AGCAGCGCCGCAAATCCTCGGCGAAGGCCGCGGAGCCGGTCGACGAGGTGGTGGCGGAAGCTGCCCCCGAGCCGCGCCGC
AAGACCGCTGCCGGCGAAGGCCGCAAGACCGGCGGGCGCCGCAAGGCCGCCTAA

Upstream 100 bases:

>100_bases
ATTTTGCAGTCGTTTTCCGGGAAAATGGCTAGAACCGGACTTGAATCTTTTCCAGATCCTTTTAGCTCACAAGAACGAGG
GGCAAACAGGATCACGTACA

Downstream 100 bases:

>100_bases
GGATCGATGCCGCGTCGGCGGAGTCATCGGACTCCGCTGGCCGGCTCCGATACGGTGGGTCGATAGGGTCTGCGCAGTAA
TAGTCCGGGCCGGCCGCCCG

Product: MucR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSETNQVTQHDRIELAADLVSAYVSNNSLPSPELAGLIVQVHAALVALSAPQAPKEEEVERATPAQIKKSITPDALISFI
DGKPYKTLKRHLTTHGLDIDGYRRRYGLPADYPTVSSNYSAARSALAKDLGLGQQRRKSSAKAAEPVDEVVAEAAPEPRR
KTAAGEGRKTGGRRKAA

Sequences:

>Translated_177_residues
MSETNQVTQHDRIELAADLVSAYVSNNSLPSPELAGLIVQVHAALVALSAPQAPKEEEVERATPAQIKKSITPDALISFI
DGKPYKTLKRHLTTHGLDIDGYRRRYGLPADYPTVSSNYSAARSALAKDLGLGQQRRKSSAKAAEPVDEVVAEAAPEPRR
KTAAGEGRKTGGRRKAA
>Mature_176_residues
SETNQVTQHDRIELAADLVSAYVSNNSLPSPELAGLIVQVHAALVALSAPQAPKEEEVERATPAQIKKSITPDALISFID
GKPYKTLKRHLTTHGLDIDGYRRRYGLPADYPTVSSNYSAARSALAKDLGLGQQRRKSSAKAAEPVDEVVAEAAPEPRRK
TAAGEGRKTGGRRKAA

Specific function: Unknown

COG id: COG4957

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ros/mucR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008807 [H]

Pfam domain/function: PF05443 ROS_MUCR [H]

EC number: NA

Molecular weight: Translated: 19010; Mature: 18878

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETNQVTQHDRIELAADLVSAYVSNNSLPSPELAGLIVQVHAALVALSAPQAPKEEEVE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RATPAQIKKSITPDALISFIDGKPYKTLKRHLTTHGLDIDGYRRRYGLPADYPTVSSNYS
HCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHH
AARSALAKDLGLGQQRRKSSAKAAEPVDEVVAEAAPEPRRKTAAGEGRKTGGRRKAA
HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETNQVTQHDRIELAADLVSAYVSNNSLPSPELAGLIVQVHAALVALSAPQAPKEEEVE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RATPAQIKKSITPDALISFIDGKPYKTLKRHLTTHGLDIDGYRRRYGLPADYPTVSSNYS
HCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHH
AARSALAKDLGLGQQRRKSSAKAAEPVDEVVAEAAPEPRRKTAAGEGRKTGGRRKAA
HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]