| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is msbA [H]
Identifier: 218532799
GI number: 218532799
Start: 5246389
End: 5248992
Strand: Reverse
Name: msbA [H]
Synonym: Mchl_4922
Alternate gene names: 218532799
Gene position: 5248992-5246389 (Counterclockwise)
Preceding gene: 218532804
Following gene: 218532798
Centisome position: 90.85
GC content: 74.69
Gene sequence:
>2604_bases ATGGAGCGTGATCCCGTCCTGTTCGCCTGGGCCTCGTCGCCGCGTCGGCACGCGGCGGCGCTCGCGCTGGCGGTGGGCCT CGGCGGACCGCTGGCGCTGTTCGTGCTGCTGTGCCTGCGCGACCTCATCTCGGTGCTGACCCGCAGCAGCCCGGACTTCC TGCCCTTCCTGCGGATCGCCCTGCCGCTGCCGGGCCATCACGGACACGAAGCGCCGATCCTGTTCCCGGGCTGGAGCCTG CCGCCGACGGAACTGCCGCTGATCGCGCTGACTTCGCTCGCCGCCGCAGCCCTGCTGCTGGCCGCCCTCGGGGCTGCGGT TGCGTATCTCTGCTTCTCCGTCCAGGCCCGGGCTACGGCGCGGCTGCGGGCGCGGGCCACCGAGGCGATCCTCGCCTCGC CCCCCGGTGCCCGCGAGGATCTCCGCGCGCTGCCCGGCCTCGTCGGCCAAGCGCTGGCGCGGATGGGCCCGCTCGCGGCG GTCGGCATCGTCGTGCCCGGCCTGACGCTCGCCGCGATCCTGCTGGCCCTCGTCATGGCGGAGCTCGCGGCCCCGCGCCT GGTGCCGGTGATCGCGCTGTTGCTCGCCGCCGTCGGGCTGGCGCGCGTCCTGCTCGCCAGCCGCACCGCCGCCCGGCGCA GCCTGCGCCTCGCCGACACCGCCGCGACGGAGGCGGGCCTGCGCGACCTGATCCGGCGGATGCCGGCGGTGCGCGCCCAC GGGGCGGCGGCGTTCGAGCGACGCCGCCTGGGGCTGCGTGCACGGGCGGCGCGCAGCGCGCTGGTGCGGGCCGAGGCCCA GCTCGCCTATGCGCGGGCCCCGGCGCTCGCGCTTGTCGTGATCCTGCCCGCCCTCCTCGTCGCCACCGCCCTGTGGCAGG GCGAGGCCGCCACGGAGGCCGACAACGTCCTGCCCGGAGCCCTGGTCGCCGCGGCCGGCGCCTTCGCTCTGGCAGCAACC CTCGTCGCGATCAGCCTGCGCCTGTGGAGCCAGTATCGTGCGGCCGCCCCGCTGTTCCGCACCATCGCCGAGACGCTCGA CGCCCTGAGCCCCCGGCTGCCGGGGAACCGATCGCGCAAGGCGGTCCCGTTCCCGGCGGCGGGCGCCCTCGTGGCGAAGG GCGTCGGCGCCTACGATCCCGGCAGCGGCGAGCGGCTGACGGGCGTCGATCTCGCCCTGCCGATGCCGGCGCATGTGGCG ATCGTGGGTCACCGCGGCAGCGGATCGCGGGCGCTCGCCGCCCTGCTTGCCGGACAGATCGAGCCCACCGCCGGCGCCGT CACCTATGGCGGCACCGACCTGCGCGCCTTCGACTCCGCCGAGCGCGCCCGGCGGATCGCGCTCGCCGGCTCGGAGGCGA TCCTGATCGAGGGGACGCTGCGCCAGAACCTGCTCTACGGCGCCCGTAGCGGCGACCGCGAGGCCTCTGGGCTGGCCGAG CGCATCGCCATCCTCAAGCTCACCGGACTCGACGCCTTCGTCTACGAGCGGGGCTTGGAAGCCTCGGTCGATCCCGAGGA CGATCCCGCCACCGCCGCGGCAGTCGTCGCCGCCCGCTGGGCCGTGCGCGAGGCGCTGGCGAGCGAGGGCATGGCCCGGC TCGTCGAGCCGTTCGATCCGGCCCGCTACAATCATCAGGCCGATATCGGCGAGAACATCCTGTTCGGCGAGGCGGTGAGC CCGGCCTTCTCGCAAGCGCGGCTCGCGGCCCACCCCTACCTGCGCGCCGTGCTGGAGGCCGAGGATCTCACGCGAACCCT GGTCGATGTCGGGCTGCAAGTGGCGCGCTCCACCGTCGAGATCTTTGCCGACCTGCCCGACGACCACCCGCTATTCGAGA CCTTCTCGCTGTTTCCGGCGGCCGAGCGGGGCTATTTCGAGGATCTGGTCGCGCGCCAGCCCGAGTCCCGCGGCTTCCGG CGTGGGCCCGCTGGCCATCGCGACCGCGAGCGGCTGATCGGGCTCGCTCTGCGCTACAGCGAGACCCGCCACCGCTTCGG CCTGATCGACGAGGCGCTCGAACAGCGTCTGGTCGCCGCCCGCCACTCCTTCGCGGCGATGCTGCCGCCGCGCTACCGCG AGAAGGTCGAGTTCTACGATCCCTCCCGACTCACCGCCGCCGCGAGCCTGGAGGAGAACCTGCTGTTCGGGCGCATCACC CAAGGTGAGGCGGGCGCCGAGGGGCGGGTGCGCGCTCTGGTGCGCCGGGTGCTCGCCGAGCAGGGGCTGGAGCCCACCGT CTACCGGCTCGGCCTCGCGGCGCGAATCGAGGCGGGCGTCGCGGTGGCGGGCCAGGGCCAGCGCGCAATCCTGGGGGAGG GCGCCATCGGCCCGCGCGAGCGGGTGGCGATCGAGTTCGTGCGCTGCCTCGTGCGCCGCCCGGACATCCTCGTGGTCGGC CTCTCCCTCGACGACCGCAAGCCCGACGAGATCACCGCCCGGATCGAGCGCCTGCGGGCGCTGCGCGCCGGGGCGGCGCT GATCGTCTGCCTGCCCGATGAGGACACCCTCAACCGGCAGGCGCCGTTCGACGCCGTGCTGCGGGTGGAGCGCAACACGG TGGTGAGCGGCGATCCGCAGGAAACCGAGGCGGTGACCGTCTGA
Upstream 100 bases:
>100_bases CCGCCGGATCGTCCTTCACAGCGCCGAAACCGTTCTCCGATGCCGCACCCCACCGCCGCGAATTCGTCGGCCACGGCTTG GCCGGGCGCCCGGAATGCCG
Downstream 100 bases:
>100_bases GCGCTTCCCTTTCCCGCAAAACCGCCCCAAAGCTTGTGCACGATCCGGTTCCGTCGCCCGTGGGCACCGCCGGTCGGCCT CTATCGAGACGGTGCATGCT
Product: multidrug ABC transporter ATPase/permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MERDPVLFAWASSPRRHAAALALAVGLGGPLALFVLLCLRDLISVLTRSSPDFLPFLRIALPLPGHHGHEAPILFPGWSL PPTELPLIALTSLAAAALLLAALGAAVAYLCFSVQARATARLRARATEAILASPPGAREDLRALPGLVGQALARMGPLAA VGIVVPGLTLAAILLALVMAELAAPRLVPVIALLLAAVGLARVLLASRTAARRSLRLADTAATEAGLRDLIRRMPAVRAH GAAAFERRRLGLRARAARSALVRAEAQLAYARAPALALVVILPALLVATALWQGEAATEADNVLPGALVAAAGAFALAAT LVAISLRLWSQYRAAAPLFRTIAETLDALSPRLPGNRSRKAVPFPAAGALVAKGVGAYDPGSGERLTGVDLALPMPAHVA IVGHRGSGSRALAALLAGQIEPTAGAVTYGGTDLRAFDSAERARRIALAGSEAILIEGTLRQNLLYGARSGDREASGLAE RIAILKLTGLDAFVYERGLEASVDPEDDPATAAAVVAARWAVREALASEGMARLVEPFDPARYNHQADIGENILFGEAVS PAFSQARLAAHPYLRAVLEAEDLTRTLVDVGLQVARSTVEIFADLPDDHPLFETFSLFPAAERGYFEDLVARQPESRGFR RGPAGHRDRERLIGLALRYSETRHRFGLIDEALEQRLVAARHSFAAMLPPRYREKVEFYDPSRLTAAASLEENLLFGRIT QGEAGAEGRVRALVRRVLAEQGLEPTVYRLGLAARIEAGVAVAGQGQRAILGEGAIGPRERVAIEFVRCLVRRPDILVVG LSLDDRKPDEITARIERLRALRAGAALIVCLPDEDTLNRQAPFDAVLRVERNTVVSGDPQETEAVTV
Sequences:
>Translated_867_residues MERDPVLFAWASSPRRHAAALALAVGLGGPLALFVLLCLRDLISVLTRSSPDFLPFLRIALPLPGHHGHEAPILFPGWSL PPTELPLIALTSLAAAALLLAALGAAVAYLCFSVQARATARLRARATEAILASPPGAREDLRALPGLVGQALARMGPLAA VGIVVPGLTLAAILLALVMAELAAPRLVPVIALLLAAVGLARVLLASRTAARRSLRLADTAATEAGLRDLIRRMPAVRAH GAAAFERRRLGLRARAARSALVRAEAQLAYARAPALALVVILPALLVATALWQGEAATEADNVLPGALVAAAGAFALAAT LVAISLRLWSQYRAAAPLFRTIAETLDALSPRLPGNRSRKAVPFPAAGALVAKGVGAYDPGSGERLTGVDLALPMPAHVA IVGHRGSGSRALAALLAGQIEPTAGAVTYGGTDLRAFDSAERARRIALAGSEAILIEGTLRQNLLYGARSGDREASGLAE RIAILKLTGLDAFVYERGLEASVDPEDDPATAAAVVAARWAVREALASEGMARLVEPFDPARYNHQADIGENILFGEAVS PAFSQARLAAHPYLRAVLEAEDLTRTLVDVGLQVARSTVEIFADLPDDHPLFETFSLFPAAERGYFEDLVARQPESRGFR RGPAGHRDRERLIGLALRYSETRHRFGLIDEALEQRLVAARHSFAAMLPPRYREKVEFYDPSRLTAAASLEENLLFGRIT QGEAGAEGRVRALVRRVLAEQGLEPTVYRLGLAARIEAGVAVAGQGQRAILGEGAIGPRERVAIEFVRCLVRRPDILVVG LSLDDRKPDEITARIERLRALRAGAALIVCLPDEDTLNRQAPFDAVLRVERNTVVSGDPQETEAVTV >Mature_867_residues MERDPVLFAWASSPRRHAAALALAVGLGGPLALFVLLCLRDLISVLTRSSPDFLPFLRIALPLPGHHGHEAPILFPGWSL PPTELPLIALTSLAAAALLLAALGAAVAYLCFSVQARATARLRARATEAILASPPGAREDLRALPGLVGQALARMGPLAA VGIVVPGLTLAAILLALVMAELAAPRLVPVIALLLAAVGLARVLLASRTAARRSLRLADTAATEAGLRDLIRRMPAVRAH GAAAFERRRLGLRARAARSALVRAEAQLAYARAPALALVVILPALLVATALWQGEAATEADNVLPGALVAAAGAFALAAT LVAISLRLWSQYRAAAPLFRTIAETLDALSPRLPGNRSRKAVPFPAAGALVAKGVGAYDPGSGERLTGVDLALPMPAHVA IVGHRGSGSRALAALLAGQIEPTAGAVTYGGTDLRAFDSAERARRIALAGSEAILIEGTLRQNLLYGARSGDREASGLAE RIAILKLTGLDAFVYERGLEASVDPEDDPATAAAVVAARWAVREALASEGMARLVEPFDPARYNHQADIGENILFGEAVS PAFSQARLAAHPYLRAVLEAEDLTRTLVDVGLQVARSTVEIFADLPDDHPLFETFSLFPAAERGYFEDLVARQPESRGFR RGPAGHRDRERLIGLALRYSETRHRFGLIDEALEQRLVAARHSFAAMLPPRYREKVEFYDPSRLTAAASLEENLLFGRIT QGEAGAEGRVRALVRRVLAEQGLEPTVYRLGLAARIEAGVAVAGQGQRAILGEGAIGPRERVAIEFVRCLVRRPDILVVG LSLDDRKPDEITARIERLRALRAGAALIVCLPDEDTLNRQAPFDAVLRVERNTVVSGDPQETEAVTV
Specific function: Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017940 - InterPro: IPR011917 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 [H]
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 92057; Mature: 92057
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00178 AA_TRNA_LIGASE_I ; PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDPVLFAWASSPRRHAAALALAVGLGGPLALFVLLCLRDLISVLTRSSPDFLPFLRIA CCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LPLPGHHGHEAPILFPGWSLPPTELPLIALTSLAAAALLLAALGAAVAYLCFSVQARATA CCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRARATEAILASPPGAREDLRALPGLVGQALARMGPLAAVGIVVPGLTLAAILLALVMA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ELAAPRLVPVIALLLAAVGLARVLLASRTAARRSLRLADTAATEAGLRDLIRRMPAVRAH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC GAAAFERRRLGLRARAARSALVRAEAQLAYARAPALALVVILPALLVATALWQGEAATEA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DNVLPGALVAAAGAFALAATLVAISLRLWSQYRAAAPLFRTIAETLDALSPRLPGNRSRK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AVPFPAAGALVAKGVGAYDPGSGERLTGVDLALPMPAHVAIVGHRGSGSRALAALLAGQI CCCCCCCCHHHHCCCCCCCCCCCCEEECCEEECCCCCEEEEEEECCCCHHHHHHHHHCCC EPTAGAVTYGGTDLRAFDSAERARRIALAGSEAILIEGTLRQNLLYGARSGDREASGLAE CCCCCEEEECCCCCHHHHHHHHHHHHHEECCCEEEEECHHHHHHHHCCCCCCCHHHHHHH RIAILKLTGLDAFVYERGLEASVDPEDDPATAAAVVAARWAVREALASEGMARLVEPFDP HHHHHEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC ARYNHQADIGENILFGEAVSPAFSQARLAAHPYLRAVLEAEDLTRTLVDVGLQVARSTVE CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFADLPDDHPLFETFSLFPAAERGYFEDLVARQPESRGFRRGPAGHRDRERLIGLALRYS HHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ETRHRFGLIDEALEQRLVAARHSFAAMLPPRYREKVEFYDPSRLTAAASLEENLLFGRIT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEC QGEAGAEGRVRALVRRVLAEQGLEPTVYRLGLAARIEAGVAVAGQGQRAILGEGAIGPRE CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCHHH RVAIEFVRCLVRRPDILVVGLSLDDRKPDEITARIERLRALRAGAALIVCLPDEDTLNRQ HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC APFDAVLRVERNTVVSGDPQETEAVTV CCHHHHHEEECCCEECCCCCCCCCCCC >Mature Secondary Structure MERDPVLFAWASSPRRHAAALALAVGLGGPLALFVLLCLRDLISVLTRSSPDFLPFLRIA CCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LPLPGHHGHEAPILFPGWSLPPTELPLIALTSLAAAALLLAALGAAVAYLCFSVQARATA CCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRARATEAILASPPGAREDLRALPGLVGQALARMGPLAAVGIVVPGLTLAAILLALVMA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ELAAPRLVPVIALLLAAVGLARVLLASRTAARRSLRLADTAATEAGLRDLIRRMPAVRAH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC GAAAFERRRLGLRARAARSALVRAEAQLAYARAPALALVVILPALLVATALWQGEAATEA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DNVLPGALVAAAGAFALAATLVAISLRLWSQYRAAAPLFRTIAETLDALSPRLPGNRSRK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AVPFPAAGALVAKGVGAYDPGSGERLTGVDLALPMPAHVAIVGHRGSGSRALAALLAGQI CCCCCCCCHHHHCCCCCCCCCCCCEEECCEEECCCCCEEEEEEECCCCHHHHHHHHHCCC EPTAGAVTYGGTDLRAFDSAERARRIALAGSEAILIEGTLRQNLLYGARSGDREASGLAE CCCCCEEEECCCCCHHHHHHHHHHHHHEECCCEEEEECHHHHHHHHCCCCCCCHHHHHHH RIAILKLTGLDAFVYERGLEASVDPEDDPATAAAVVAARWAVREALASEGMARLVEPFDP HHHHHEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC ARYNHQADIGENILFGEAVSPAFSQARLAAHPYLRAVLEAEDLTRTLVDVGLQVARSTVE CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFADLPDDHPLFETFSLFPAAERGYFEDLVARQPESRGFRRGPAGHRDRERLIGLALRYS HHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ETRHRFGLIDEALEQRLVAARHSFAAMLPPRYREKVEFYDPSRLTAAASLEENLLFGRIT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEC QGEAGAEGRVRALVRRVLAEQGLEPTVYRLGLAARIEAGVAVAGQGQRAILGEGAIGPRE CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCHHH RVAIEFVRCLVRRPDILVVGLSLDDRKPDEITARIERLRALRAGAALIVCLPDEDTLNRQ HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC APFDAVLRVERNTVVSGDPQETEAVTV CCHHHHHEEECCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA