Click here to switch to the map view.

The map label for this gene is omp31 [H]

Identifier: 218532784

GI number: 218532784

Start: 5228409

End: 5229299

Strand: Reverse

Name: omp31 [H]

Synonym: Mchl_4907

Alternate gene names: 218532784

Gene position: 5229299-5228409 (Counterclockwise)

Preceding gene: 218532785

Following gene: 218532782

Centisome position: 90.51

GC content: 67.9

Gene sequence:

>891_bases
GTGAAAAAGCTTCTCACCTCTCTCGCCGCCTTCACGGCGCTGACCGCGGCGGCCTCCGCCGCCGACCTGCCGCGCCGCGC
TGCTCCGCCGCCGGTCTTCACGCCAATCCCGGTGTTCACCTGGACCGGTTTCTACGCCGGTTTCAACGCTGGCTACGGCT
TCGGCGTCGATGACAACGGTGCGGCTCCGGTCGTCGGCGTGAACAGCCTGACCGGCCTCGTGCGTCCCGGCCAGACCGCC
GTCATCGCCTTCGGCGGCAACAGCCGCAGCGACGGCTTCGTCGGCGGTGGTCAGATCGGCTACAACTACCAGTTCACCCC
GGGCTCCGGTGTCGTGATCGGTATCGAGGCCGACGCTCAGTACGTCGATTTCGGCCGTGACCGGAACCAGTTCGCGGTCG
CGAACAGCAACCCGGCCTTCCCGGGCGTCGCCGCTCAGCAGGTGTTCAACCCGAACGGCCTGTCCAGCCTCGACTTCTTC
GGCACCGTCCGCGGTCGCCTCGGCTACGCCTTCGACCGCGTCCTGTTCTACGGCACCGGCGGCTTCGCCTACGGCGCCGG
CGGCGGCCGTCAGTTCGGTCTGCCGAACAGCTCCTCCGACGACTTCCGCACCGGCTACGCTGCTGGCGGTGGTGTCGAGT
ACGCTCTCCCGACCGACTCGTTCCTGAACTTCTTCCGCTCTTCGGCCGTCACGCTGAAGGTCGAAGGTCTGTACGTGAAC
CTCGATCGCGGCGGCGGTGCCCTCAACGGCGCCTTCGCGGTGAACAATGCCGGCGCCGTCATCGGCACGACCAGCCCGGG
CGTGATCGTCGTTTCCGGCCCCTCGCGCCGCAACGACACCGAGTTCGCCGTCGTCCGCGCCGGCCTGAACTACAAGTTCG
GCAGCTACTAA

Upstream 100 bases:

>100_bases
GGGTCGATTGTGGCCCCCCGGGTGTGGCCTGTTCGCTACATCTCAGGCCAGGGAAATGGTCTAGCTTGTGGGCGATCGGG
TTTCTGCTGGGGATCAACAA

Downstream 100 bases:

>100_bases
GCCGAACCTTCAATAACAGGGTCTCGAAACCAGGGAGCCCGGCCGCAAGGCCGGGCTTCTTGCGTTTTGGGGCCCGTCGC
GAGCGAAGCAAGGCACGAAA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKKLLTSLAAFTALTAAASAADLPRRAAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNGAAPVVGVNSLTGLVRPGQTA
VIAFGGNSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYVDFGRDRNQFAVANSNPAFPGVAAQQVFNPNGLSSLDFF
GTVRGRLGYAFDRVLFYGTGGFAYGAGGGRQFGLPNSSSDDFRTGYAAGGGVEYALPTDSFLNFFRSSAVTLKVEGLYVN
LDRGGGALNGAFAVNNAGAVIGTTSPGVIVVSGPSRRNDTEFAVVRAGLNYKFGSY

Sequences:

>Translated_296_residues
MKKLLTSLAAFTALTAAASAADLPRRAAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNGAAPVVGVNSLTGLVRPGQTA
VIAFGGNSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYVDFGRDRNQFAVANSNPAFPGVAAQQVFNPNGLSSLDFF
GTVRGRLGYAFDRVLFYGTGGFAYGAGGGRQFGLPNSSSDDFRTGYAAGGGVEYALPTDSFLNFFRSSAVTLKVEGLYVN
LDRGGGALNGAFAVNNAGAVIGTTSPGVIVVSGPSRRNDTEFAVVRAGLNYKFGSY
>Mature_296_residues
MKKLLTSLAAFTALTAAASAADLPRRAAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNGAAPVVGVNSLTGLVRPGQTA
VIAFGGNSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYVDFGRDRNQFAVANSNPAFPGVAAQQVFNPNGLSSLDFF
GTVRGRLGYAFDRVLFYGTGGFAYGAGGGRQFGLPNSSSDDFRTGYAAGGGVEYALPTDSFLNFFRSSAVTLKVEGLYVN
LDRGGGALNGAFAVNNAGAVIGTTSPGVIVVSGPSRRNDTEFAVVRAGLNYKFGSY

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 30515; Mature: 30515

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLTSLAAFTALTAAASAADLPRRAAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCHHCCCCCCCCCCCCCCC
AAPVVGVNSLTGLVRPGQTAVIAFGGNSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQ
CCCEEECCHHHHCCCCCCEEEEEECCCCCCCCCCCCCEECEEEEECCCCCEEEEEECCCE
YVDFGRDRNQFAVANSNPAFPGVAAQQVFNPNGLSSLDFFGTVRGRLGYAFDRVLFYGTG
EEECCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECC
GFAYGAGGGRQFGLPNSSSDDFRTGYAAGGGVEYALPTDSFLNFFRSSAVTLKVEGLYVN
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEEEEEEEEE
LDRGGGALNGAFAVNNAGAVIGTTSPGVIVVSGPSRRNDTEFAVVRAGLNYKFGSY
EECCCCEEECEEEECCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MKKLLTSLAAFTALTAAASAADLPRRAAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCHHCCCCCCCCCCCCCCC
AAPVVGVNSLTGLVRPGQTAVIAFGGNSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQ
CCCEEECCHHHHCCCCCCEEEEEECCCCCCCCCCCCCEECEEEEECCCCCEEEEEECCCE
YVDFGRDRNQFAVANSNPAFPGVAAQQVFNPNGLSSLDFFGTVRGRLGYAFDRVLFYGTG
EEECCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECC
GFAYGAGGGRQFGLPNSSSDDFRTGYAAGGGVEYALPTDSFLNFFRSSAVTLKVEGLYVN
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEEEEEEEEE
LDRGGGALNGAFAVNNAGAVIGTTSPGVIVVSGPSRRNDTEFAVVRAGLNYKFGSY
EECCCCEEECEEEECCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]