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The map label for this gene is yhjB [H]

Identifier: 218532767

GI number: 218532767

Start: 5201810

End: 5203270

Strand: Reverse

Name: yhjB [H]

Synonym: Mchl_4890

Alternate gene names: 218532767

Gene position: 5203270-5201810 (Counterclockwise)

Preceding gene: 218532768

Following gene: 218532761

Centisome position: 90.05

GC content: 67.35

Gene sequence:

>1461_bases
ATGAACGCCGCCCTTGCGATCATCGCGCTCGCCGTCGTGGTGGCGCTCGGCCTGGGCCTGCGTGCACGGTCGGGCCACGA
CATGGACATGGAGCAGTGGAGCGTGGGCAAGCGCGGCTTCGGCACGCTGCTCGTCTTCCTGCTGATGGCAGGCGAGATCT
ACACCACCTTCACCTTCCTCGGCGGCTCGGGCTGGGCCTACGGCAAGGGCGGGCCGACCTACTACATCCTCTGCTACCTG
ACGCTGATCTACGTCATCTCCTACTGGATCCTGCCGCCGGCCTGGCGCTTCGCCAAGGAGCGCAACCTATTCTCGCAGCC
CGATTATTTTGCCGCGCGCTACGACAGCCGCAGCCTCGGCATCCTGGTCGCGCTGGTCGGGATCGTGGCGCTCGTTCCCT
ACATGGTGCTCCAGCTCAAGGGGCTCGGCATTATCGTCGCCACCGCCTCCTACGGCGCGATCTCGCAGACCCTGGCGATC
TGGATCGGCGCGGCGGTGCTGACCGTCTACGTGATGGTCTCCGGCGTGCGCGGCTCGGCCTGGACTGCCGTGCTCAAGGA
TTTCATGATCCTGTTCGTGGTGATCTTTTTGGGAATCTACCTGCCGTATCACTACTACGGCGGCATCGGCCCGATGTTCG
AGGCCATCGATACGGCCAAGCCCGGCTTCCTGGCGCTGCCGGACCGGGGCCAGAGCGCGACGTGGTTCGCCTCGACCACG
CTGCTCACGGCGCTCGGCGGCTGGATGTTCCCGCACATCTTCGCCTCGATCTATACCGCGAGCGATGCGCGCACGTTCCG
GCGCAACGCGGTGTTCCTGCCGCTCTACCAGCTCATGCTGCTGTTCGTGTTCTTCGCCGGGTTCGCGGCCGTGCTGCAGG
TGCCGGGGCTGACCGGGCCGGACGTCGATCTCTCGCTGTTCAGGATCGCGCTCGAGACCTTCCCACCGTGGTTCGTCGGC
GTCATCGGTGCCACCGGCGTGCTGACCGCCCTGGTGCCGGGTTCGATGATCCTGATCGCGGGTTCGACGCTCATCGCGCA
GAACCTCTACCGGCCGCTGGCGCGCAACGCGACCGACGCCACCACGGGTAAGCTCGCCAAGGGGATCGCGCCGCTGCTGG
CGATCGCCTGCGTCGGCTTCACCCTCTACGGCGGTGAGACCATCGTGCAGCTCCTGCTGATCGGCTACGCGGTCGTCACG
CAGCTCTTCCCGGCCTTCTTCTTCAGCCTGTGGACCCACAACCCGCTCACGCGGGCGGGGGCGATGGCCGGCATCCTGGC
CGGAGTGGCCGCGGTGGCGGTGACCGTGCTCGGCGGCTACACGCTGGCCAAGCTCTTCCCGGGCCTGCCGGGGCCGGTGC
AGGATCTCAACATCGGCGTGGTGGCACTCGCCCTCAACCTTGCCGTGGCCTTCGCCGTCAGCCTTGCGGGCAAGCGCACG
CGGCAGACGGCGCTCTCCTGA

Upstream 100 bases:

>100_bases
TGCTGCTGGCGTGGCTCGTCGGCTGCACCGTGGCGACCTCGGCGATCATGGGGCTGATCTACCTCACCGATCCCGCCAAC
CGGGAACCGGAGGAGGGGCC

Downstream 100 bases:

>100_bases
GCCCCGGAAGGCGGGGAGGCCGGGCGGTCAGCGCCCGGCCGGCTCCGCCTCGCCCGCCTGCGCCTCCGCCGGGGCAGGCA
CGGATCCGTCCTCCCGCACA

Product: Na+/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MNAALAIIALAVVVALGLGLRARSGHDMDMEQWSVGKRGFGTLLVFLLMAGEIYTTFTFLGGSGWAYGKGGPTYYILCYL
TLIYVISYWILPPAWRFAKERNLFSQPDYFAARYDSRSLGILVALVGIVALVPYMVLQLKGLGIIVATASYGAISQTLAI
WIGAAVLTVYVMVSGVRGSAWTAVLKDFMILFVVIFLGIYLPYHYYGGIGPMFEAIDTAKPGFLALPDRGQSATWFASTT
LLTALGGWMFPHIFASIYTASDARTFRRNAVFLPLYQLMLLFVFFAGFAAVLQVPGLTGPDVDLSLFRIALETFPPWFVG
VIGATGVLTALVPGSMILIAGSTLIAQNLYRPLARNATDATTGKLAKGIAPLLAIACVGFTLYGGETIVQLLLIGYAVVT
QLFPAFFFSLWTHNPLTRAGAMAGILAGVAAVAVTVLGGYTLAKLFPGLPGPVQDLNIGVVALALNLAVAFAVSLAGKRT
RQTALS

Sequences:

>Translated_486_residues
MNAALAIIALAVVVALGLGLRARSGHDMDMEQWSVGKRGFGTLLVFLLMAGEIYTTFTFLGGSGWAYGKGGPTYYILCYL
TLIYVISYWILPPAWRFAKERNLFSQPDYFAARYDSRSLGILVALVGIVALVPYMVLQLKGLGIIVATASYGAISQTLAI
WIGAAVLTVYVMVSGVRGSAWTAVLKDFMILFVVIFLGIYLPYHYYGGIGPMFEAIDTAKPGFLALPDRGQSATWFASTT
LLTALGGWMFPHIFASIYTASDARTFRRNAVFLPLYQLMLLFVFFAGFAAVLQVPGLTGPDVDLSLFRIALETFPPWFVG
VIGATGVLTALVPGSMILIAGSTLIAQNLYRPLARNATDATTGKLAKGIAPLLAIACVGFTLYGGETIVQLLLIGYAVVT
QLFPAFFFSLWTHNPLTRAGAMAGILAGVAAVAVTVLGGYTLAKLFPGLPGPVQDLNIGVVALALNLAVAFAVSLAGKRT
RQTALS
>Mature_486_residues
MNAALAIIALAVVVALGLGLRARSGHDMDMEQWSVGKRGFGTLLVFLLMAGEIYTTFTFLGGSGWAYGKGGPTYYILCYL
TLIYVISYWILPPAWRFAKERNLFSQPDYFAARYDSRSLGILVALVGIVALVPYMVLQLKGLGIIVATASYGAISQTLAI
WIGAAVLTVYVMVSGVRGSAWTAVLKDFMILFVVIFLGIYLPYHYYGGIGPMFEAIDTAKPGFLALPDRGQSATWFASTT
LLTALGGWMFPHIFASIYTASDARTFRRNAVFLPLYQLMLLFVFFAGFAAVLQVPGLTGPDVDLSLFRIALETFPPWFVG
VIGATGVLTALVPGSMILIAGSTLIAQNLYRPLARNATDATTGKLAKGIAPLLAIACVGFTLYGGETIVQLLLIGYAVVT
QLFPAFFFSLWTHNPLTRAGAMAGILAGVAAVAVTVLGGYTLAKLFPGLPGPVQDLNIGVVALALNLAVAFAVSLAGKRT
RQTALS

Specific function: Unknown

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=419, Percent_Identity=22.673031026253, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 51854; Mature: 51854

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAALAIIALAVVVALGLGLRARSGHDMDMEQWSVGKRGFGTLLVFLLMAGEIYTTFTFL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCHHHHHHEEE
GGSGWAYGKGGPTYYILCYLTLIYVISYWILPPAWRFAKERNLFSQPDYFAARYDSRSLG
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHCCCCHHH
ILVALVGIVALVPYMVLQLKGLGIIVATASYGAISQTLAIWIGAAVLTVYVMVSGVRGSA
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WTAVLKDFMILFVVIFLGIYLPYHYYGGIGPMFEAIDTAKPGFLALPDRGQSATWFASTT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHH
LLTALGGWMFPHIFASIYTASDARTFRRNAVFLPLYQLMLLFVFFAGFAAVLQVPGLTGP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVDLSLFRIALETFPPWFVGVIGATGVLTALVPGSMILIAGSTLIAQNLYRPLARNATDA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCC
TTGKLAKGIAPLLAIACVGFTLYGGETIVQLLLIGYAVVTQLFPAFFFSLWTHNPLTRAG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AMAGILAGVAAVAVTVLGGYTLAKLFPGLPGPVQDLNIGVVALALNLAVAFAVSLAGKRT
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHH
RQTALS
HHHCCC
>Mature Secondary Structure
MNAALAIIALAVVVALGLGLRARSGHDMDMEQWSVGKRGFGTLLVFLLMAGEIYTTFTFL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCHHHHHHEEE
GGSGWAYGKGGPTYYILCYLTLIYVISYWILPPAWRFAKERNLFSQPDYFAARYDSRSLG
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHCCCCHHH
ILVALVGIVALVPYMVLQLKGLGIIVATASYGAISQTLAIWIGAAVLTVYVMVSGVRGSA
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WTAVLKDFMILFVVIFLGIYLPYHYYGGIGPMFEAIDTAKPGFLALPDRGQSATWFASTT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHH
LLTALGGWMFPHIFASIYTASDARTFRRNAVFLPLYQLMLLFVFFAGFAAVLQVPGLTGP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVDLSLFRIALETFPPWFVGVIGATGVLTALVPGSMILIAGSTLIAQNLYRPLARNATDA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCC
TTGKLAKGIAPLLAIACVGFTLYGGETIVQLLLIGYAVVTQLFPAFFFSLWTHNPLTRAG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AMAGILAGVAAVAVTVLGGYTLAKLFPGLPGPVQDLNIGVVALALNLAVAFAVSLAGKRT
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHH
RQTALS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]