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The map label for this gene is 218532761

Identifier: 218532761

GI number: 218532761

Start: 5196788

End: 5197981

Strand: Reverse

Name: 218532761

Synonym: Mchl_4884

Alternate gene names: NA

Gene position: 5197981-5196788 (Counterclockwise)

Preceding gene: 218532767

Following gene: 218532755

Centisome position: 89.96

GC content: 69.6

Gene sequence:

>1194_bases
ATGCCAAAAGGTTTCCGCTGGTCGCGCCTTCTCCTTGCCGCGGCGGTTGCCGGGCAGGCGGCGGCCTGCTCTTCCTTGCC
GCGAACGAACTACACGGAGAGCGAGGCGGAAGCCGCGACCGTTCCGGGGATGGTCGGGGTGCGGGCCTATGCCGATGCCG
GCGCCGCCGATTTCGTGGCGATGGCCGCCGGCCCGCAGAAGAAGCGTCAAGCCTTCACCTATCTCGCGCTCTCGGGCGGC
GGGGGTGACGGCGCCTACGGCGCAGGCGTGCTCAACGGCTGGACCGCCTCGGGCAAGCGGCCGGAATTCACCATCGTCTC
CGGCGTCTCGACCGGTGCCCTGATCGCGCCCTTCGCCTTCCTCGGGCCCGCCTACGATCCCTACCTCACCGATATCTACA
CCAGCGGCATCGCCGACTCGCTGGTGCAGAGCCCGAGCATCGCCAACGTGCTGTTCGGCTCCGGCCTGTTCGGCGACGGG
CGGCTGCGCAACCTGATCGCCCGCTACGTCACGCCCGAGCTGCTGCAGGCCGTGGCGGAGGAGCACGCCAAGGGCCGCCG
CCTGCTCGTGGTGACGACGAATCTCGACACGCAGCGCGCCGTGATCTGGAACATGGGCGCCATCGCCGCGAGCGGCGCGC
CCAACGCGGTGTCCTTGTTCACCGACGTGCTCACCGCCTCGGCGAGCATCCCGGCGGTGTTCCCGCCCCAGCTTCTCGAC
GTGCAGGCGGAGGGCCGCGCCTTCCAGGAAATGCACGTGGACGGCTCGGTGGTGACGCCGGTCTTCACCCTCCCGCAATC
CTTCCTGGTGCGCGACGGGCGCTTCCGCAGCGCGGGCAAGGCCGACATCTACGTGGTCATCAACGGCCGCCTCGAACCAG
AATTCGAGGTGACCAAGAACAACACCCTGTCGATCGTCGAGAAGTCCTTCACCACCGCGAGCCGCGCCCGCTCGCGGGCG
ACGCTGGTGGCCACCGACGTGTTCGCCCGCCGCAACGGGATGGGCTTCAACCTGACCTACATCGACGAGCGCGCGCCGCA
GACCACGACGGCGCGCGGCTTCGACACCGCCTACATGCGCAGCCTCTACCAGTTCGGCTACGAGGCCGGGCGTACGGGTC
AGTTCTGGCAGCCGAGCGTGCCGGCGGCGCCGTTGGTCAAGAACGTGGTGCGGGAGGCGGTGGCGGCGCGCTGA

Upstream 100 bases:

>100_bases
CCGGCGTTTGAGCGCAACACGCGTGTGCGGGAACGCAATACGGCCAAGCTCGTTTCGTGTAAGCTTGCCCTGTTCCATCG
GGCTTGTTCGGGTCATGTCG

Downstream 100 bases:

>100_bases
ACGCCGCCAGGGTCACAGGGCGATGCGCAGCGGCTCGGCGCTGAGGCGTACCGCACCCGCACGGCGTCCGGTCTCGCCGA
CCGCGTACTGGAACGCCGCC

Product: patatin

Products: NA

Alternate protein names: Lipoprotein; Patatin-Like Phospholipase Domain-Containing Protein; Phospholipase Patatin Family; Lipid Acyl Hydrolase Patatin-Like Domain; Patatin-Like Domain; Alpha/Beta Superfamily Hydrolase

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MPKGFRWSRLLLAAAVAGQAAACSSLPRTNYTESEAEAATVPGMVGVRAYADAGAADFVAMAAGPQKKRQAFTYLALSGG
GGDGAYGAGVLNGWTASGKRPEFTIVSGVSTGALIAPFAFLGPAYDPYLTDIYTSGIADSLVQSPSIANVLFGSGLFGDG
RLRNLIARYVTPELLQAVAEEHAKGRRLLVVTTNLDTQRAVIWNMGAIAASGAPNAVSLFTDVLTASASIPAVFPPQLLD
VQAEGRAFQEMHVDGSVVTPVFTLPQSFLVRDGRFRSAGKADIYVVINGRLEPEFEVTKNNTLSIVEKSFTTASRARSRA
TLVATDVFARRNGMGFNLTYIDERAPQTTTARGFDTAYMRSLYQFGYEAGRTGQFWQPSVPAAPLVKNVVREAVAAR

Sequences:

>Translated_397_residues
MPKGFRWSRLLLAAAVAGQAAACSSLPRTNYTESEAEAATVPGMVGVRAYADAGAADFVAMAAGPQKKRQAFTYLALSGG
GGDGAYGAGVLNGWTASGKRPEFTIVSGVSTGALIAPFAFLGPAYDPYLTDIYTSGIADSLVQSPSIANVLFGSGLFGDG
RLRNLIARYVTPELLQAVAEEHAKGRRLLVVTTNLDTQRAVIWNMGAIAASGAPNAVSLFTDVLTASASIPAVFPPQLLD
VQAEGRAFQEMHVDGSVVTPVFTLPQSFLVRDGRFRSAGKADIYVVINGRLEPEFEVTKNNTLSIVEKSFTTASRARSRA
TLVATDVFARRNGMGFNLTYIDERAPQTTTARGFDTAYMRSLYQFGYEAGRTGQFWQPSVPAAPLVKNVVREAVAAR
>Mature_396_residues
PKGFRWSRLLLAAAVAGQAAACSSLPRTNYTESEAEAATVPGMVGVRAYADAGAADFVAMAAGPQKKRQAFTYLALSGGG
GDGAYGAGVLNGWTASGKRPEFTIVSGVSTGALIAPFAFLGPAYDPYLTDIYTSGIADSLVQSPSIANVLFGSGLFGDGR
LRNLIARYVTPELLQAVAEEHAKGRRLLVVTTNLDTQRAVIWNMGAIAASGAPNAVSLFTDVLTASASIPAVFPPQLLDV
QAEGRAFQEMHVDGSVVTPVFTLPQSFLVRDGRFRSAGKADIYVVINGRLEPEFEVTKNNTLSIVEKSFTTASRARSRAT
LVATDVFARRNGMGFNLTYIDERAPQTTTARGFDTAYMRSLYQFGYEAGRTGQFWQPSVPAAPLVKNVVREAVAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42155; Mature: 42024

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKGFRWSRLLLAAAVAGQAAACSSLPRTNYTESEAEAATVPGMVGVRAYADAGAADFVA
CCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCHHEEE
MAAGPQKKRQAFTYLALSGGGGDGAYGAGVLNGWTASGKRPEFTIVSGVSTGALIAPFAF
ECCCCHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH
LGPAYDPYLTDIYTSGIADSLVQSPSIANVLFGSGLFGDGRLRNLIARYVTPELLQAVAE
HCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHH
EHAKGRRLLVVTTNLDTQRAVIWNMGAIAASGAPNAVSLFTDVLTASASIPAVFPPQLLD
HHHCCCEEEEEEECCCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHEE
VQAEGRAFQEMHVDGSVVTPVFTLPQSFLVRDGRFRSAGKADIYVVINGRLEPEFEVTKN
ECCCCCCHHHHCCCCCEECHHHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEECCC
NTLSIVEKSFTTASRARSRATLVATDVFARRNGMGFNLTYIDERAPQTTTARGFDTAYMR
CEEEEHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHH
SLYQFGYEAGRTGQFWQPSVPAAPLVKNVVREAVAAR
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKGFRWSRLLLAAAVAGQAAACSSLPRTNYTESEAEAATVPGMVGVRAYADAGAADFVA
CCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCHHEEE
MAAGPQKKRQAFTYLALSGGGGDGAYGAGVLNGWTASGKRPEFTIVSGVSTGALIAPFAF
ECCCCHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH
LGPAYDPYLTDIYTSGIADSLVQSPSIANVLFGSGLFGDGRLRNLIARYVTPELLQAVAE
HCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHH
EHAKGRRLLVVTTNLDTQRAVIWNMGAIAASGAPNAVSLFTDVLTASASIPAVFPPQLLD
HHHCCCEEEEEEECCCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHEE
VQAEGRAFQEMHVDGSVVTPVFTLPQSFLVRDGRFRSAGKADIYVVINGRLEPEFEVTKN
ECCCCCCHHHHCCCCCEECHHHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEECCC
NTLSIVEKSFTTASRARSRATLVATDVFARRNGMGFNLTYIDERAPQTTTARGFDTAYMR
CEEEEHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHH
SLYQFGYEAGRTGQFWQPSVPAAPLVKNVVREAVAAR
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA