| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is yjgR [H]
Identifier: 218532755
GI number: 218532755
Start: 5191380
End: 5192945
Strand: Reverse
Name: yjgR [H]
Synonym: Mchl_4878
Alternate gene names: 218532755
Gene position: 5192945-5191380 (Counterclockwise)
Preceding gene: 218532761
Following gene: 218532754
Centisome position: 89.88
GC content: 69.6
Gene sequence:
>1566_bases ATGACAGCGGGCGAGGGGACGATTCTGGTCGGCCGGAGCACGGGGCCGCAACCGAAGCCCGAGGTGCTGAGCCTGCGGCT GGCCAACCGCCACGGCCTCGTGGCGGGCGCCACCGGCACCGGCAAGACCGTGACGCTGCAGGTGCTGGCGGAGGGCTTTT CCAACGCGGGCGTCCCGGTCTTCGCCGCCGACATCAAGGGCGACCTCTCGGGGCTCGCCGCCGCGGGCGAGGCCAAGCCG CATTTCGTCAAGCGGGCGGAAGAACTCGGGATACCTTACGAGCCCGACCGCTTCCCGACGATGTTCTGGGACGTGTTCGG CGAGCAGGGCCACCCGATCCGCTGCACCGTCACCGAGATGGGCCCGCTGCTGCTCGCCCGCCTGCTCGAACTCAACGACA TCCAGGAGGGCGTGCTCAACATCGCCTTCCGTGTCGCCGACGAGAACCAGTGGCCGCTGATCGACCTGAAGGATCTGCGC GCGCTCCTCACTTTCTTGTCGGAGAACGCCAAGGAGCTGTCGGCCACCTACGGCAACGTCTCGGGCGCCTCGATCGGCGC GATCCAGCGGGCGCTGCTCGTGCTGGAGAACCAGGGCGCCGACCAATTCCTCGGCGAGCCGGCGCTCAACCTCGAAGACT TCATGCGGACCGACCGGGAGGGCCGAGGCTTCGTCAACATCCTGGCCGCCGACAAGCTGATGCAGCGGCCGCGCCTCTAC GCCTCGTTCCTGCTGTGGATGCTCTCCGAGTTGTTCGAGCAGCTTCCCGAGGTCGGCGATCTCGACAAGCCCAAGCTCGT GTTCTTCTTCGACGAGGCGCATCTGCTGTTCAACGACGCGCCGAAGGCCCTTCTCGACGCGGTGGAGCAGGTGGTGCGCC TGATTCGCTCGAAGGGCGTCGGCGTCTACTTCGTGACGCAGAACCCGCTCGACGTGCCGGAAACGGTGCTCGGCCAGCTC GGTAACCGGGTGCAGCACGCGCTGCGCGCCTTCACCCCGCGCGACCAGCGCGCCGTGCGCGCCGCCGCCGAGACCTTCCG CCAGAACCCCGGCTTCGATGTCGGCAAGGCGATCACCGAACTCGCCGTCGGCGAGGCGCTGGTGAGTTTTCTGGAAGCCA AGGGCACGCCCTCGGTCGTGGAACGGGCGCTGATCGCCCCGCCGCAGGGGCGGGTGGGGCCGCTGACGCCGGCCGAGCGC GCCGCGATCATCGGGCAGAGCCCCCTGCGCGGAAAATACGACGAGGCGATCGACAACGAGAGCGCCTACGAGATGCTGGC CCAGCGCAAGCACCTCGATTCCGCCCCGGCGGAGGCCGCGGGCCAGAGCGAAGGCGGCCTCTCGGGCATGCTCGGCGGCT GGCTCGGTGGGATCTTCGGCAGCGGCGAGGAAGCGGCATCGAAGGGCAAAGGGGCCGGCAAGGGAACCGGCCGCACCCGC CGCCCGCCGCCGAGTCTGGCCGAGCAGGTCATCGGCAACGCCGCCCGCTCCATGGCGCGCAAGGTCGGCACGGAGGTGGG CGACGCGATCCTGCGGAATGTGCTGGGCGGGCTGACGAAGCGGTAG
Upstream 100 bases:
>100_bases CAAGAGTTGCCGATGTCCCGGCCCTGGATCGGGCGGGCGGGGCGCCATACCCTGTCGGTCACAACACCTGCACAACGGCG ACGGATCGGACGAGGACGGC
Downstream 100 bases:
>100_bases GCGGGTCTTCGTCTTGCCTTGACAGAAGCCCTGCTCCCGACTATCCGGCCGGCACCGCGCGGCTTCCTCGACGAAGTCCG CGCGTTTCGCGTTCGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MTAGEGTILVGRSTGPQPKPEVLSLRLANRHGLVAGATGTGKTVTLQVLAEGFSNAGVPVFAADIKGDLSGLAAAGEAKP HFVKRAEELGIPYEPDRFPTMFWDVFGEQGHPIRCTVTEMGPLLLARLLELNDIQEGVLNIAFRVADENQWPLIDLKDLR ALLTFLSENAKELSATYGNVSGASIGAIQRALLVLENQGADQFLGEPALNLEDFMRTDREGRGFVNILAADKLMQRPRLY ASFLLWMLSELFEQLPEVGDLDKPKLVFFFDEAHLLFNDAPKALLDAVEQVVRLIRSKGVGVYFVTQNPLDVPETVLGQL GNRVQHALRAFTPRDQRAVRAAAETFRQNPGFDVGKAITELAVGEALVSFLEAKGTPSVVERALIAPPQGRVGPLTPAER AAIIGQSPLRGKYDEAIDNESAYEMLAQRKHLDSAPAEAAGQSEGGLSGMLGGWLGGIFGSGEEAASKGKGAGKGTGRTR RPPPSLAEQVIGNAARSMARKVGTEVGDAILRNVLGGLTKR
Sequences:
>Translated_521_residues MTAGEGTILVGRSTGPQPKPEVLSLRLANRHGLVAGATGTGKTVTLQVLAEGFSNAGVPVFAADIKGDLSGLAAAGEAKP HFVKRAEELGIPYEPDRFPTMFWDVFGEQGHPIRCTVTEMGPLLLARLLELNDIQEGVLNIAFRVADENQWPLIDLKDLR ALLTFLSENAKELSATYGNVSGASIGAIQRALLVLENQGADQFLGEPALNLEDFMRTDREGRGFVNILAADKLMQRPRLY ASFLLWMLSELFEQLPEVGDLDKPKLVFFFDEAHLLFNDAPKALLDAVEQVVRLIRSKGVGVYFVTQNPLDVPETVLGQL GNRVQHALRAFTPRDQRAVRAAAETFRQNPGFDVGKAITELAVGEALVSFLEAKGTPSVVERALIAPPQGRVGPLTPAER AAIIGQSPLRGKYDEAIDNESAYEMLAQRKHLDSAPAEAAGQSEGGLSGMLGGWLGGIFGSGEEAASKGKGAGKGTGRTR RPPPSLAEQVIGNAARSMARKVGTEVGDAILRNVLGGLTKR >Mature_520_residues TAGEGTILVGRSTGPQPKPEVLSLRLANRHGLVAGATGTGKTVTLQVLAEGFSNAGVPVFAADIKGDLSGLAAAGEAKPH FVKRAEELGIPYEPDRFPTMFWDVFGEQGHPIRCTVTEMGPLLLARLLELNDIQEGVLNIAFRVADENQWPLIDLKDLRA LLTFLSENAKELSATYGNVSGASIGAIQRALLVLENQGADQFLGEPALNLEDFMRTDREGRGFVNILAADKLMQRPRLYA SFLLWMLSELFEQLPEVGDLDKPKLVFFFDEAHLLFNDAPKALLDAVEQVVRLIRSKGVGVYFVTQNPLDVPETVLGQLG NRVQHALRAFTPRDQRAVRAAAETFRQNPGFDVGKAITELAVGEALVSFLEAKGTPSVVERALIAPPQGRVGPLTPAERA AIIGQSPLRGKYDEAIDNESAYEMLAQRKHLDSAPAEAAGQSEGGLSGMLGGWLGGIFGSGEEAASKGKGAGKGTGRTRR PPPSLAEQVIGNAARSMARKVGTEVGDAILRNVLGGLTKR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=497, Percent_Identity=56.5392354124749, Blast_Score=535, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 55781; Mature: 55650
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGEGTILVGRSTGPQPKPEVLSLRLANRHGLVAGATGTGKTVTLQVLAEGFSNAGVPV CCCCCCCEEEECCCCCCCCHHHEEEEECCCCCEEEECCCCCCEEEHHHHHHHHCCCCCCE FAADIKGDLSGLAAAGEAKPHFVKRAEELGIPYEPDRFPTMFWDVFGEQGHPIRCTVTEM EEECCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHH GPLLLARLLELNDIQEGVLNIAFRVADENQWPLIDLKDLRALLTFLSENAKELSATYGNV HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEECHHHHHHHHHHHHCCHHHHHHHCCCC SGASIGAIQRALLVLENQGADQFLGEPALNLEDFMRTDREGRGFVNILAADKLMQRPRLY CCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH ASFLLWMLSELFEQLPEVGDLDKPKLVFFFDEAHLLFNDAPKALLDAVEQVVRLIRSKGV HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCC GVYFVTQNPLDVPETVLGQLGNRVQHALRAFTPRDQRAVRAAAETFRQNPGFDVGKAITE EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LAVGEALVSFLEAKGTPSVVERALIAPPQGRVGPLTPAERAAIIGQSPLRGKYDEAIDNE HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCH SAYEMLAQRKHLDSAPAEAAGQSEGGLSGMLGGWLGGIFGSGEEAASKGKGAGKGTGRTR HHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC RPPPSLAEQVIGNAARSMARKVGTEVGDAILRNVLGGLTKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAGEGTILVGRSTGPQPKPEVLSLRLANRHGLVAGATGTGKTVTLQVLAEGFSNAGVPV CCCCCCEEEECCCCCCCCHHHEEEEECCCCCEEEECCCCCCEEEHHHHHHHHCCCCCCE FAADIKGDLSGLAAAGEAKPHFVKRAEELGIPYEPDRFPTMFWDVFGEQGHPIRCTVTEM EEECCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHH GPLLLARLLELNDIQEGVLNIAFRVADENQWPLIDLKDLRALLTFLSENAKELSATYGNV HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEECHHHHHHHHHHHHCCHHHHHHHCCCC SGASIGAIQRALLVLENQGADQFLGEPALNLEDFMRTDREGRGFVNILAADKLMQRPRLY CCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH ASFLLWMLSELFEQLPEVGDLDKPKLVFFFDEAHLLFNDAPKALLDAVEQVVRLIRSKGV HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCC GVYFVTQNPLDVPETVLGQLGNRVQHALRAFTPRDQRAVRAAAETFRQNPGFDVGKAITE EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LAVGEALVSFLEAKGTPSVVERALIAPPQGRVGPLTPAERAAIIGQSPLRGKYDEAIDNE HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCH SAYEMLAQRKHLDSAPAEAAGQSEGGLSGMLGGWLGGIFGSGEEAASKGKGAGKGTGRTR HHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC RPPPSLAEQVIGNAARSMARKVGTEVGDAILRNVLGGLTKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]