Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218710409
Identifier: 218710409
GI number: 218710409
Start: 2616741
End: 2617271
Strand: Reverse
Name: 218710409
Synonym: VS_2446
Alternate gene names: NA
Gene position: 2617271-2616741 (Counterclockwise)
Preceding gene: 218710410
Following gene: 218710408
Centisome position: 79.33
GC content: 34.65
Gene sequence:
>531_bases ATGATTAATGAGCCTTCTGTTTTTTGGGCATTGCTAATTGCTGTATCGGTATACGATGTTGAGAAACATCGTATACCAAA CAAAATATTGATTCTTTTTTTTGTTTTTTATTTTTTATCAATGTTCAACAGCAATTACACCTTTGATAGTTTCTTAATGT CTTTATTTGGGTCGGTCGTATTCTTTTGTTTTGGATTGCTATTCTATTTTTTAAGAGCAATGTCTGCAGGGGATGTGAAG TTATTAGGTGTTGTAGGAATGTATTTGGGGTGGGGACAATTACTCGATGCATCGTACTTTATCTTGGTTTCTTCTGGAGT TGTTGGGGTTTTCTACCTGCTATACAACCTGTCCAACTCGAGCTGTTTTAGTATTAAAAGCTATTTTGAAAATAAGATAA TTGTGCTTGGTGGAGCTGCACCAGTCATTGATAAAACAGCTAATTTACATACTCGGTATTCAAATAAAGTAACGATGCCT TTTGCTCCTTCTGTTGTTATAGGGTTAGCGATGTATAGCTACTTTACTTAA
Upstream 100 bases:
>100_bases TGCCTCGCTCATAATTTTTGTCGGGCTAATTTTTTCTGGAATGGCTACGACATTAGTGAGTAAATTTCAAAGTATTATAT CGAGCGTATGAATTGAAATT
Downstream 100 bases:
>100_bases ATCTGTTGTTGGTTAGCTTTGTGGGGAGACATAATATATGGATATTATAGGGCGTACTGCTCCAACAACCTTGAAGCCAC AAATTTCAGCCCCAATCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MINEPSVFWALLIAVSVYDVEKHRIPNKILILFFVFYFLSMFNSNYTFDSFLMSLFGSVVFFCFGLLFYFLRAMSAGDVK LLGVVGMYLGWGQLLDASYFILVSSGVVGVFYLLYNLSNSSCFSIKSYFENKIIVLGGAAPVIDKTANLHTRYSNKVTMP FAPSVVIGLAMYSYFT
Sequences:
>Translated_176_residues MINEPSVFWALLIAVSVYDVEKHRIPNKILILFFVFYFLSMFNSNYTFDSFLMSLFGSVVFFCFGLLFYFLRAMSAGDVK LLGVVGMYLGWGQLLDASYFILVSSGVVGVFYLLYNLSNSSCFSIKSYFENKIIVLGGAAPVIDKTANLHTRYSNKVTMP FAPSVVIGLAMYSYFT >Mature_176_residues MINEPSVFWALLIAVSVYDVEKHRIPNKILILFFVFYFLSMFNSNYTFDSFLMSLFGSVVFFCFGLLFYFLRAMSAGDVK LLGVVGMYLGWGQLLDASYFILVSSGVVGVFYLLYNLSNSSCFSIKSYFENKIIVLGGAAPVIDKTANLHTRYSNKVTMP FAPSVVIGLAMYSYFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.23.43
Molecular weight: Translated: 19834; Mature: 19834
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINEPSVFWALLIAVSVYDVEKHRIPNKILILFFVFYFLSMFNSNYTFDSFLMSLFGSVV CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FFCFGLLFYFLRAMSAGDVKLLGVVGMYLGWGQLLDASYFILVSSGVVGVFYLLYNLSNS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC SCFSIKSYFENKIIVLGGAAPVIDKTANLHTRYSNKVTMPFAPSVVIGLAMYSYFT CHHHHHHHHCCEEEEEECCCCHHHCCCCHHECCCCEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MINEPSVFWALLIAVSVYDVEKHRIPNKILILFFVFYFLSMFNSNYTFDSFLMSLFGSVV CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FFCFGLLFYFLRAMSAGDVKLLGVVGMYLGWGQLLDASYFILVSSGVVGVFYLLYNLSNS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC SCFSIKSYFENKIIVLGGAAPVIDKTANLHTRYSNKVTMPFAPSVVIGLAMYSYFT CHHHHHHHHCCEEEEEECCCCHHHCCCCHHECCCCEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA