Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218710410
Identifier: 218710410
GI number: 218710410
Start: 2617445
End: 2617615
Strand: Reverse
Name: 218710410
Synonym: VS_2447
Alternate gene names: NA
Gene position: 2617615-2617445 (Counterclockwise)
Preceding gene: 218710412
Following gene: 218710409
Centisome position: 79.34
GC content: 35.09
Gene sequence:
>171_bases ATGGATAAGTTTTTGAATAATTGTAAAGAATTCATGAAAGATGAAGAAGGGTTGACTGTTATCGAGTATGTAATTGGTGC AGCGTTACTGGTATTAGGCTTGACCACTATATTTACTGGTTTTGGGGCAGCCCTATCCGCTAAGCTTAATAACATCATTA ACAGTATTTAA
Upstream 100 bases:
>100_bases CAAGTAAATGGCAAAAAAATCCTAACCAAATATATCTCTCACCTCTAGATTTACTTTACAGGCAAACAAAGCCTGATACG TAAATCAAGGAGAGGTTCTC
Downstream 100 bases:
>100_bases TGATTACTGCCATGGTTGCTCGGAGAGTGAGACAGCAAAAGGGGTTAACGACTATTGAGTATGTCATTGGTGCTGCCTCG CTCATAATTTTTGTCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MDKFLNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI
Sequences:
>Translated_56_residues MDKFLNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI >Mature_56_residues MDKFLNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6066; Mature: 6066
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFLNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDKFLNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA