Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218710344
Identifier: 218710344
GI number: 218710344
Start: 2549158
End: 2549499
Strand: Reverse
Name: 218710344
Synonym: VS_2380
Alternate gene names: NA
Gene position: 2549499-2549158 (Counterclockwise)
Preceding gene: 218710345
Following gene: 218710343
Centisome position: 77.27
GC content: 42.69
Gene sequence:
>342_bases ATGAAAGCATTGTTGATAGCATCTCTATGTACGGTAGCGTTATTCGGATGCTCTAAATCAGCAGCTCCTGAGACTGAGAG CGCAGTATCGGACGATCAATTCGTGATTTATCAATGTGAGTCTGACGCTTCATTTAAGGTCGCTTACCTTGGTGATGAAA AAGCGGTATTACGTTTACCCGAGAATGAATATCGCCTCACTCAAATAGCGGCAGGCTCAGGAACGAAGTACATCTTAGAT GATGGAACCTCTGAACTGATCAATAGCGTAACTTTACGAACTAAAGGTGACAATGCACGTCTAGAACTTGGTCGTGTTAT CTATAAAAACTGCCGAAAGTAG
Upstream 100 bases:
>100_bases CAGTATTAAAGATGTACCAGCATTCTTAAAAGGTTAAGACACTAAGTCTCTTTCACTTAGATATAAGTGTTATTCACTAT ATAAAGATGAGGAACGCAGT
Downstream 100 bases:
>100_bases GTCATAGTTATCGACTAGGATTTACAAACAGTTAAGTGAGGGAGTTCGCCCTCACTTTTTCTTTCTCTTCCCTTTAACGT CAGACTTTTTATGAGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLPENEYRLTQIAAGSGTKYILD DGTSELINSVTLRTKGDNARLELGRVIYKNCRK
Sequences:
>Translated_113_residues MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLPENEYRLTQIAAGSGTKYILD DGTSELINSVTLRTKGDNARLELGRVIYKNCRK >Mature_113_residues MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLPENEYRLTQIAAGSGTKYILD DGTSELINSVTLRTKGDNARLELGRVIYKNCRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12330; Mature: 12330
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLP CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEECC ENEYRLTQIAAGSGTKYILDDGTSELINSVTLRTKGDNARLELGRVIYKNCRK CCCEEEEEEECCCCCEEEEECCHHHHHHEEEEEECCCCCEEHHHHHHHHHCCC >Mature Secondary Structure MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLP CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEECC ENEYRLTQIAAGSGTKYILDDGTSELINSVTLRTKGDNARLELGRVIYKNCRK CCCEEEEEEECCCCCEEEEECCHHHHHHEEEEEECCCCCEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA