Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is gmhB [H]
Identifier: 218710345
GI number: 218710345
Start: 2549563
End: 2550114
Strand: Reverse
Name: gmhB [H]
Synonym: VS_2381
Alternate gene names: 218710345
Gene position: 2550114-2549563 (Counterclockwise)
Preceding gene: 218710351
Following gene: 218710344
Centisome position: 77.29
GC content: 43.66
Gene sequence:
>552_bases TTGTCTAAACCTGCTGTTTTTTTAGATCGTGATGGTGTGATTAACGTTGATCACGGCTACGTACATGATGAACATGACTT TGAATACATCGATGGTGTGTTTGAAGCGGCGAAAGCGTTTAAAGATATGGGTTATTTATTGGTGTTAGTGACCAACCAAT CTGGTATTGCTCGCGGCATGTTTAGTGAAGACCGTTTTCTTTCTCTAACGCAGTGGATGGATTGGAACTTTGTTGATAAC GGCGTTGAGCTAGATGGTATTTATTACTGCCCGCACCACGCTGAGCACGGTGTTGGTGACTACAAACAAGATTGTGAATG TCGTAAACCAAAGCCAGGCATGTTCATTTCTGCGCGTGACTTTCTGAAGATTGATATGGCTAACTCGGTCATGATCGGCG ATAAAGCTGAAGACATGATGGCTGCAGAAGCGGCGGGTGTTGGCACTAAAGTACTGGTAAGAACCGGTAAGCCAATCACT GAAAAAGGTGAAGCGCTTGCAAGTGTCGTGCTTGACAGTATTAAAGATGTACCAGCATTCTTAAAAGGTTAA
Upstream 100 bases:
>100_bases AAACAAATCGTTAACGAACGCAAAACTAAATAGATAGTGATGAAGCAAATAAAGCGTGTAATAATTAATGATTAATAGAG AGTTGATAGAGAACTGAATT
Downstream 100 bases:
>100_bases GACACTAAGTCTCTTTCACTTAGATATAAGTGTTATTCACTATATAAAGATGAGGAACGCAGTATGAAAGCATTGTTGAT AGCATCTCTATGTACGGTAG
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSKPAVFLDRDGVINVDHGYVHDEHDFEYIDGVFEAAKAFKDMGYLLVLVTNQSGIARGMFSEDRFLSLTQWMDWNFVDN GVELDGIYYCPHHAEHGVGDYKQDCECRKPKPGMFISARDFLKIDMANSVMIGDKAEDMMAAEAAGVGTKVLVRTGKPIT EKGEALASVVLDSIKDVPAFLKG
Sequences:
>Translated_183_residues MSKPAVFLDRDGVINVDHGYVHDEHDFEYIDGVFEAAKAFKDMGYLLVLVTNQSGIARGMFSEDRFLSLTQWMDWNFVDN GVELDGIYYCPHHAEHGVGDYKQDCECRKPKPGMFISARDFLKIDMANSVMIGDKAEDMMAAEAAGVGTKVLVRTGKPIT EKGEALASVVLDSIKDVPAFLKG >Mature_182_residues SKPAVFLDRDGVINVDHGYVHDEHDFEYIDGVFEAAKAFKDMGYLLVLVTNQSGIARGMFSEDRFLSLTQWMDWNFVDNG VELDGIYYCPHHAEHGVGDYKQDCECRKPKPGMFISARDFLKIDMANSVMIGDKAEDMMAAEAAGVGTKVLVRTGKPITE KGEALASVVLDSIKDVPAFLKG
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=181, Percent_Identity=62.9834254143646, Blast_Score=247, Evalue=4e-67, Organism=Escherichia coli, GI87082027, Length=150, Percent_Identity=31.3333333333333, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 3.1.1.-
Molecular weight: Translated: 20273; Mature: 20142
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPAVFLDRDGVINVDHGYVHDEHDFEYIDGVFEAAKAFKDMGYLLVLVTNQSGIARGM CCCCCEEEECCCEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC FSEDRFLSLTQWMDWNFVDNGVELDGIYYCPHHAEHGVGDYKQDCECRKPKPGMFISARD CCCCCEEEHHHHCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCC FLKIDMANSVMIGDKAEDMMAAEAAGVGTKVLVRTGKPITEKGEALASVVLDSIKDVPAF EEEEECCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH LKG HCC >Mature Secondary Structure SKPAVFLDRDGVINVDHGYVHDEHDFEYIDGVFEAAKAFKDMGYLLVLVTNQSGIARGM CCCCEEEECCCEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC FSEDRFLSLTQWMDWNFVDNGVELDGIYYCPHHAEHGVGDYKQDCECRKPKPGMFISARD CCCCCEEEHHHHCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCC FLKIDMANSVMIGDKAEDMMAAEAAGVGTKVLVRTGKPITEKGEALASVVLDSIKDVPAF EEEEECCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH LKG HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301; 12101286 [H]