The gene/protein map for NC_011753 is currently unavailable.
Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218709354

Identifier: 218709354

GI number: 218709354

Start: 1473974

End: 1474429

Strand: Direct

Name: 218709354

Synonym: VS_1363

Alternate gene names: NA

Gene position: 1473974-1474429 (Clockwise)

Preceding gene: 218709351

Following gene: 218709355

Centisome position: 44.68

GC content: 36.84

Gene sequence:

>456_bases
ATGTGTTATGACGTAACTATGATTAATTATAAGAAAAAAATTTATCTACTATCTCTATGTTTACTTTTTGGCTGTAAGAC
AACGGAGCAAATAGTACAAGAGCGTGAGGTTGCTATTTCCAATATGGATAACTTAGATATATGTTACAACCTAGGAAAAC
AAGATGATTTCAACTACTGGAAGCTTATTAAGAATGAACAGTTCCATAGGAAAAATACAACTCATTCATGGGATGTTCCG
AATGATCTGTGCAACAAAGCTATTGAGATGGGTAGAGCGGCTCTACTGAAAAGCGAGATGCGAGAGCAGAGACACAGAGA
TGAATTAGTCGATACTATTAATAGTGCCTCTAAGTCAATAAGTGATGGGTATAAGAAATCGGCAGATGCCTATGGCTCGC
AAACTAGAACAACCTGTCAAAGCTACGGCTCTGAAACCAACTGTATTTCATATTAG

Upstream 100 bases:

>100_bases
CGTTAGTCATTTCATCAACCTTACTTTTCGTTGAGCAGTAAAGGTGAATCGATTTACCTCACATTTTTTTGACTGATGAT
ATGTAATATCAATAGTTTGT

Downstream 100 bases:

>100_bases
TGAATGGTTAATAAACTGTTTAAGAGTGATTTTCAACGCGCGGTATTTTCACCATGCGTTGTGTTTAGTATGGCGTGCGA
AAGCATTTGTATTGCGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MCYDVTMINYKKKIYLLSLCLLFGCKTTEQIVQEREVAISNMDNLDICYNLGKQDDFNYWKLIKNEQFHRKNTTHSWDVP
NDLCNKAIEMGRAALLKSEMREQRHRDELVDTINSASKSISDGYKKSADAYGSQTRTTCQSYGSETNCISY

Sequences:

>Translated_151_residues
MCYDVTMINYKKKIYLLSLCLLFGCKTTEQIVQEREVAISNMDNLDICYNLGKQDDFNYWKLIKNEQFHRKNTTHSWDVP
NDLCNKAIEMGRAALLKSEMREQRHRDELVDTINSASKSISDGYKKSADAYGSQTRTTCQSYGSETNCISY
>Mature_151_residues
MCYDVTMINYKKKIYLLSLCLLFGCKTTEQIVQEREVAISNMDNLDICYNLGKQDDFNYWKLIKNEQFHRKNTTHSWDVP
NDLCNKAIEMGRAALLKSEMREQRHRDELVDTINSASKSISDGYKKSADAYGSQTRTTCQSYGSETNCISY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17495; Mature: 17495

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYDVTMINYKKKIYLLSLCLLFGCKTTEQIVQEREVAISNMDNLDICYNLGKQDDFNYW
CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHH
KLIKNEQFHRKNTTHSWDVPNDLCNKAIEMGRAALLKSEMREQRHRDELVDTINSASKSI
HHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDGYKKSADAYGSQTRTTCQSYGSETNCISY
HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MCYDVTMINYKKKIYLLSLCLLFGCKTTEQIVQEREVAISNMDNLDICYNLGKQDDFNYW
CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHH
KLIKNEQFHRKNTTHSWDVPNDLCNKAIEMGRAALLKSEMREQRHRDELVDTINSASKSI
HHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDGYKKSADAYGSQTRTTCQSYGSETNCISY
HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA