| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709355
Identifier: 218709355
GI number: 218709355
Start: 1474567
End: 1474989
Strand: Direct
Name: 218709355
Synonym: VS_1364
Alternate gene names: NA
Gene position: 1474567-1474989 (Clockwise)
Preceding gene: 218709354
Following gene: 218709356
Centisome position: 44.69
GC content: 36.88
Gene sequence:
>423_bases ATGAAGAAACTAGTTATTGTTTTGTTGGCAACCTTCCCATTGTTTGCATTATGTGATGACTCCAAAAAGTACGAAGAGCT ACTTACAGGTTTCAAAGAGTCTCAAGCATACAAGAGCGTAGCTATTGGTGTTTGGGATTGCGTTTCCCTGTCTGATAAAG ATGTTGTCTCAGTGTTAAGTTTACAGCCAGATCATATGGTCTATTACAATGCGCTAGACAAGTATTATTTCTCCCTGCAA GACAGCAGTGATAAAAAACGTGTAACGTTACTTGAAAGAGGCTTGAAGGCAGTCAATAAAATAAAACACAGCACAATGGC TGACGAATTGGAATTTGATTACTCTACTCATATTGTTAGCTTCAAACCATTTGCTAGTGCATATGGTAATTTTTCAAATT ATCAGTGTACGAAACGAAAGTAA
Upstream 100 bases:
>100_bases GCGCGGTATTTTCACCATGCGTTGTGTTTAGTATGGCGTGCGAAAGCATTTGTATTGCGTGTCTAACGCCTTAATTAGGT GTTAAATTACAGAGGCAAGA
Downstream 100 bases:
>100_bases TTTAACAAATGATCTGCTCCAGTCAGGCTGGAAACCAAGTTAAGTGATTTTCCATACTTCTAGTTATTCATAAATTGCTA ATTTAGGGGAAGCCATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLSLQPDHMVYYNALDKYYFSLQ DSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVSFKPFASAYGNFSNYQCTKRK
Sequences:
>Translated_140_residues MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLSLQPDHMVYYNALDKYYFSLQ DSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVSFKPFASAYGNFSNYQCTKRK >Mature_140_residues MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLSLQPDHMVYYNALDKYYFSLQ DSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVSFKPFASAYGNFSNYQCTKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16019; Mature: 16019
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLS CCHHEEHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LQPDHMVYYNALDKYYFSLQDSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVS CCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE FKPFASAYGNFSNYQCTKRK ECCHHHHCCCCCCCEECCCC >Mature Secondary Structure MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLS CCHHEEHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LQPDHMVYYNALDKYYFSLQDSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVS CCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE FKPFASAYGNFSNYQCTKRK ECCHHHHCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA