Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709355

Identifier: 218709355

GI number: 218709355

Start: 1474567

End: 1474989

Strand: Direct

Name: 218709355

Synonym: VS_1364

Alternate gene names: NA

Gene position: 1474567-1474989 (Clockwise)

Preceding gene: 218709354

Following gene: 218709356

Centisome position: 44.69

GC content: 36.88

Gene sequence:

>423_bases
ATGAAGAAACTAGTTATTGTTTTGTTGGCAACCTTCCCATTGTTTGCATTATGTGATGACTCCAAAAAGTACGAAGAGCT
ACTTACAGGTTTCAAAGAGTCTCAAGCATACAAGAGCGTAGCTATTGGTGTTTGGGATTGCGTTTCCCTGTCTGATAAAG
ATGTTGTCTCAGTGTTAAGTTTACAGCCAGATCATATGGTCTATTACAATGCGCTAGACAAGTATTATTTCTCCCTGCAA
GACAGCAGTGATAAAAAACGTGTAACGTTACTTGAAAGAGGCTTGAAGGCAGTCAATAAAATAAAACACAGCACAATGGC
TGACGAATTGGAATTTGATTACTCTACTCATATTGTTAGCTTCAAACCATTTGCTAGTGCATATGGTAATTTTTCAAATT
ATCAGTGTACGAAACGAAAGTAA

Upstream 100 bases:

>100_bases
GCGCGGTATTTTCACCATGCGTTGTGTTTAGTATGGCGTGCGAAAGCATTTGTATTGCGTGTCTAACGCCTTAATTAGGT
GTTAAATTACAGAGGCAAGA

Downstream 100 bases:

>100_bases
TTTAACAAATGATCTGCTCCAGTCAGGCTGGAAACCAAGTTAAGTGATTTTCCATACTTCTAGTTATTCATAAATTGCTA
ATTTAGGGGAAGCCATAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLSLQPDHMVYYNALDKYYFSLQ
DSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVSFKPFASAYGNFSNYQCTKRK

Sequences:

>Translated_140_residues
MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLSLQPDHMVYYNALDKYYFSLQ
DSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVSFKPFASAYGNFSNYQCTKRK
>Mature_140_residues
MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLSLQPDHMVYYNALDKYYFSLQ
DSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVSFKPFASAYGNFSNYQCTKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16019; Mature: 16019

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLS
CCHHEEHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LQPDHMVYYNALDKYYFSLQDSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVS
CCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
FKPFASAYGNFSNYQCTKRK
ECCHHHHCCCCCCCEECCCC
>Mature Secondary Structure
MKKLVIVLLATFPLFALCDDSKKYEELLTGFKESQAYKSVAIGVWDCVSLSDKDVVSVLS
CCHHEEHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LQPDHMVYYNALDKYYFSLQDSSDKKRVTLLERGLKAVNKIKHSTMADELEFDYSTHIVS
CCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
FKPFASAYGNFSNYQCTKRK
ECCHHHHCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA