| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709286
Identifier: 218709286
GI number: 218709286
Start: 1391613
End: 1391801
Strand: Direct
Name: 218709286
Synonym: VS_1295
Alternate gene names: NA
Gene position: 1391613-1391801 (Clockwise)
Preceding gene: 218709285
Following gene: 218709293
Centisome position: 42.18
GC content: 41.27
Gene sequence:
>189_bases ATGCCTGAATATCTGTGCGAGACTTGTACCGTAGCTTATTGCTTTGATGATTGTAATTCGGCATTGGCGCAACGAGAAAT GATTGAAGTAGAAGAAGTCTTGGATCGTAAACAAGTAAGCCAAGATCCTGAACGGCGGCTTAAACAAGAAAATTCAGACA TAAAAAATCCCTACAAGCACAGCCTGTAG
Upstream 100 bases:
>100_bases AATTGTTATGTTCTAGGATGAATATGTGGTTTGTTGCCACTCGGTGATTAGACTATCTCAAAGGACAAAGGACAAAGGAC AAAGGACAAAGGATGGAGCG
Downstream 100 bases:
>100_bases GGATTTTGTACGTTGCAATACTGTTCTCGCTTTCTCAAGCAAAGGGTCTTACAAAAATTTTTAGAACAGTGTTATTCGAC AATAAATTATTGACGAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MPEYLCETCTVAYCFDDCNSALAQREMIEVEEVLDRKQVSQDPERRLKQENSDIKNPYKHSL
Sequences:
>Translated_62_residues MPEYLCETCTVAYCFDDCNSALAQREMIEVEEVLDRKQVSQDPERRLKQENSDIKNPYKHSL >Mature_61_residues PEYLCETCTVAYCFDDCNSALAQREMIEVEEVLDRKQVSQDPERRLKQENSDIKNPYKHSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7311; Mature: 7180
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEYLCETCTVAYCFDDCNSALAQREMIEVEEVLDRKQVSQDPERRLKQENSDIKNPYKH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC SL CC >Mature Secondary Structure PEYLCETCTVAYCFDDCNSALAQREMIEVEEVLDRKQVSQDPERRLKQENSDIKNPYKH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC SL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA