Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709285

Identifier: 218709285

GI number: 218709285

Start: 1390549

End: 1391283

Strand: Direct

Name: 218709285

Synonym: VS_1294

Alternate gene names: NA

Gene position: 1390549-1391283 (Clockwise)

Preceding gene: 218709283

Following gene: 218709286

Centisome position: 42.15

GC content: 41.9

Gene sequence:

>735_bases
GTGAACCAGCAATCTGGACAAGGCGAACAAGGTGAAGTGGTTGTTATTGAGGAACGCGATAAACGTAGTCAGCTCTATAT
CGGCATTGCTGCGGTTATCGGTTTGGCGTTAGGCGGCTTAATCGGATCTACAGTCACGGCTTCGAAGTGGGAATCCACTT
ATCAGGTACTAGAAACTCGTTATCAAGAACTGCGTGATAGTAAAACTCAGTTGGTGACATCAGTTGAAGAGAAAGTGGCA
AAAGTTGATACCGAAATTGATGCGAAAGTAGAAGCTGCTCTAGTGAAACAGGCAGAAGAGCATCAAAAAGAACTCCAAGA
TTTAGCGAAACAATCTGCAGTTTTAGAGAAAGCAAACTACTCGTTAGAGCAGCAGTTAAACGAACAGAAGCAAACGTTAG
AACAAACTCAACAAAATAATCAAAAGTTGAGCCGTCAAGCTGATATGCAGTCGACCCTTTTTGAACGTTCGCGTGAGCTT
TTCCGCAAAGAATTACAGATATCTCAAGAGCTTGAAAAACTCGAGAAAGAAAGAGATGACATCGAACAGAATCTTGGTTC
TTTGAAGAAAGCGTGTGATGTTTTCTTAGATGGTACGTCATGGGATACAAAATCTGACGCCTGTGAGAAACAGGATAATG
CCAATTCCCGCTTAAGTGACATCAGACAAATGATTGAAGTTCACACCATGGATATCAAGCAGATCAAGACTCTCACTGAA
GAGATGGGTCTATAA

Upstream 100 bases:

>100_bases
TTTAACTGAGCTTAAAGTATCAGTATCAGTATCAGTATCAGTATCAGTATCAGTATCAGTGACCGTGTAACGTTAAACAA
ATTTTTGGGAGTACCCGCTA

Downstream 100 bases:

>100_bases
GCTGAGCGCTTAATATAGCCATATCACGACTACTTGCAGTAAGAATTTGAACGCCCACATCGCACACGTGATGTGGGCGT
TTTGCGTTCTCACCCCCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETRYQELRDSKTQLVTSVEEKVA
KVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANYSLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSREL
FRKELQISQELEKLEKERDDIEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE
EMGL

Sequences:

>Translated_244_residues
MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETRYQELRDSKTQLVTSVEEKVA
KVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANYSLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSREL
FRKELQISQELEKLEKERDDIEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE
EMGL
>Mature_244_residues
MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETRYQELRDSKTQLVTSVEEKVA
KVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANYSLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSREL
FRKELQISQELEKLEKERDDIEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE
EMGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27767; Mature: 27767

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETR
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQELRDSKTQLVTSVEEKVAKVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSRELFRKELQISQELEKLEKERDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EMGL
HHCC
>Mature Secondary Structure
MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETR
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQELRDSKTQLVTSVEEKVAKVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSRELFRKELQISQELEKLEKERDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EMGL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA