| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709285
Identifier: 218709285
GI number: 218709285
Start: 1390549
End: 1391283
Strand: Direct
Name: 218709285
Synonym: VS_1294
Alternate gene names: NA
Gene position: 1390549-1391283 (Clockwise)
Preceding gene: 218709283
Following gene: 218709286
Centisome position: 42.15
GC content: 41.9
Gene sequence:
>735_bases GTGAACCAGCAATCTGGACAAGGCGAACAAGGTGAAGTGGTTGTTATTGAGGAACGCGATAAACGTAGTCAGCTCTATAT CGGCATTGCTGCGGTTATCGGTTTGGCGTTAGGCGGCTTAATCGGATCTACAGTCACGGCTTCGAAGTGGGAATCCACTT ATCAGGTACTAGAAACTCGTTATCAAGAACTGCGTGATAGTAAAACTCAGTTGGTGACATCAGTTGAAGAGAAAGTGGCA AAAGTTGATACCGAAATTGATGCGAAAGTAGAAGCTGCTCTAGTGAAACAGGCAGAAGAGCATCAAAAAGAACTCCAAGA TTTAGCGAAACAATCTGCAGTTTTAGAGAAAGCAAACTACTCGTTAGAGCAGCAGTTAAACGAACAGAAGCAAACGTTAG AACAAACTCAACAAAATAATCAAAAGTTGAGCCGTCAAGCTGATATGCAGTCGACCCTTTTTGAACGTTCGCGTGAGCTT TTCCGCAAAGAATTACAGATATCTCAAGAGCTTGAAAAACTCGAGAAAGAAAGAGATGACATCGAACAGAATCTTGGTTC TTTGAAGAAAGCGTGTGATGTTTTCTTAGATGGTACGTCATGGGATACAAAATCTGACGCCTGTGAGAAACAGGATAATG CCAATTCCCGCTTAAGTGACATCAGACAAATGATTGAAGTTCACACCATGGATATCAAGCAGATCAAGACTCTCACTGAA GAGATGGGTCTATAA
Upstream 100 bases:
>100_bases TTTAACTGAGCTTAAAGTATCAGTATCAGTATCAGTATCAGTATCAGTATCAGTATCAGTGACCGTGTAACGTTAAACAA ATTTTTGGGAGTACCCGCTA
Downstream 100 bases:
>100_bases GCTGAGCGCTTAATATAGCCATATCACGACTACTTGCAGTAAGAATTTGAACGCCCACATCGCACACGTGATGTGGGCGT TTTGCGTTCTCACCCCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETRYQELRDSKTQLVTSVEEKVA KVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANYSLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSREL FRKELQISQELEKLEKERDDIEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE EMGL
Sequences:
>Translated_244_residues MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETRYQELRDSKTQLVTSVEEKVA KVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANYSLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSREL FRKELQISQELEKLEKERDDIEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE EMGL >Mature_244_residues MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETRYQELRDSKTQLVTSVEEKVA KVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANYSLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSREL FRKELQISQELEKLEKERDDIEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE EMGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27767; Mature: 27767
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETR CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQELRDSKTQLVTSVEEKVAKVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSRELFRKELQISQELEKLEKERDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EMGL HHCC >Mature Secondary Structure MNQQSGQGEQGEVVVIEERDKRSQLYIGIAAVIGLALGGLIGSTVTASKWESTYQVLETR CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQELRDSKTQLVTSVEEKVAKVDTEIDAKVEAALVKQAEEHQKELQDLAKQSAVLEKANY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLEQQLNEQKQTLEQTQQNNQKLSRQADMQSTLFERSRELFRKELQISQELEKLEKERDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEQNLGSLKKACDVFLDGTSWDTKSDACEKQDNANSRLSDIRQMIEVHTMDIKQIKTLTE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EMGL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA